torch>=2.0.0
transformers>=4.30.0
pygenetic_code>=0.20.0
typer>=0.9.0
tqdm>=4.65.0
protobuf>=6.33.1
sentencepiece>=0.2.1
biopython>=1.80

[dev]
pytest>=7.0
pytest-cov>=4.0
pytest-mock>=3.10.0
pytest-asyncio>=0.21.0
black>=23.0.0
ruff>=0.1.0
mypy>=1.0.0

[docs]
sphinx>=7.0.0
sphinx-rtd-theme>=2.0.0
myst-parser>=2.0.0
linkify-it-py>=2.0.0
