anndata>0.9.0
genimtools>=0.0.12
fastembed>=0.2.5
gensim
genomicranges>=0.4.1
huggingface_hub
logmuse
matplotlib
hnswlib
numpy>=1.24.0
paramiko>=3.0.0
peppy>=0.40.1
pyBigWig
qdrant_client
requests>=2.31.0
scanpy
seaborn
torch
ubiquerg>=0.6.3
pyarrow
iranges
lightning
langchain-huggingface==0.0.2
botocore>=1.34.54
boto3>=1.34.54
scipy<=1.12.0
pybiocfilecache>=0.4.0
zarr>=2.17.2
pyyaml>=6.0.1
s3fs>=2024.3.1
