LICENSE
MANIFEST.in
README.md
setup.py
genairics/ATACseq.py
genairics/ChIPseq.py
genairics/RNAseq.py
genairics/VARseq.py
genairics/__init__.py
genairics/__main__.py
genairics/config.py
genairics/datasources.py
genairics/jobs.py
genairics/mixins.py
genairics/pb.py
genairics/progdeps.py
genairics/resources.py
genairics/targets.py
genairics/utils.py
genairics.egg-info/PKG-INFO
genairics.egg-info/SOURCES.txt
genairics.egg-info/dependency_links.txt
genairics.egg-info/entry_points.txt
genairics.egg-info/not-zip-safe
genairics.egg-info/requires.txt
genairics.egg-info/top_level.txt
genairics/pipelines/__init__.py
genairics/pipelines/bacterial/__init__.py
genairics/pipelines/bacterial/salmonella.py
genairics/scripts/buildRSEMindex.sh
genairics/scripts/gax_bash_vsc.sh
genairics/scripts/genairics_dependencies.sh
genairics/scripts/polyester_wrapper.R
genairics/scripts/qualitycheck.sh
genairics/scripts/simpleDEvoom.R
genairics/static/js/main.js
genairics/tasks/__init__.py
genairics/tasks/qc.py
genairics/tasks/project/__init__.py
genairics/tasks/project/variants.py
genairics/tasks/sample/__init__.py
genairics/tasks/sample/assembly.py
genairics/tasks/sample/mapping.py
genairics/tasks/sample/preprocessing.py
genairics/tasks/sample/qc.py
genairics/templates/index.html