LICENSE
README.md
pyproject.toml
Gen_EpiX.egg-info/PKG-INFO
Gen_EpiX.egg-info/SOURCES.txt
Gen_EpiX.egg-info/dependency_links.txt
Gen_EpiX.egg-info/requires.txt
Gen_EpiX.egg-info/top_level.txt
gen_epix/__init__.py
gen_epix/casedb/__init__.py
gen_epix/casedb/app.py
gen_epix/casedb/env.py
gen_epix/casedb/api/__init__.py
gen_epix/casedb/api/abac.py
gen_epix/casedb/api/case.py
gen_epix/casedb/api/geo.py
gen_epix/casedb/api/ontology.py
gen_epix/casedb/api/organization.py
gen_epix/casedb/api/router.py
gen_epix/casedb/api/subject.py
gen_epix/casedb/config/__init__.py
gen_epix/casedb/domain/__init__.py
gen_epix/casedb/domain/enum.py
gen_epix/casedb/domain/exc.py
gen_epix/casedb/domain/command/__init__.py
gen_epix/casedb/domain/command/abac.py
gen_epix/casedb/domain/command/case.py
gen_epix/casedb/domain/command/geo.py
gen_epix/casedb/domain/command/ontology.py
gen_epix/casedb/domain/command/seqdb.py
gen_epix/casedb/domain/command/subject.py
gen_epix/casedb/domain/model/__init__.py
gen_epix/casedb/domain/model/geo.py
gen_epix/casedb/domain/model/ontology.py
gen_epix/casedb/domain/model/seqdb.py
gen_epix/casedb/domain/model/subject.py
gen_epix/casedb/domain/model/abac/__init__.py
gen_epix/casedb/domain/model/abac/policy.py
gen_epix/casedb/domain/model/abac/rights.py
gen_epix/casedb/domain/model/case/__init__.py
gen_epix/casedb/domain/model/case/complete_case_type.py
gen_epix/casedb/domain/model/case/non_persistable.py
gen_epix/casedb/domain/model/case/persistable.py
gen_epix/casedb/domain/policy/__init__.py
gen_epix/casedb/domain/policy/abac.py
gen_epix/casedb/domain/policy/permission.py
gen_epix/casedb/domain/repository/__init__.py
gen_epix/casedb/domain/repository/case.py
gen_epix/casedb/domain/repository/geo.py
gen_epix/casedb/domain/repository/ontology.py
gen_epix/casedb/domain/repository/subject.py
gen_epix/casedb/domain/service/__init__.py
gen_epix/casedb/domain/service/abac.py
gen_epix/casedb/domain/service/case.py
gen_epix/casedb/domain/service/geo.py
gen_epix/casedb/domain/service/ontology.py
gen_epix/casedb/domain/service/seqdb.py
gen_epix/casedb/domain/service/subject.py
gen_epix/casedb/policies/__init__.py
gen_epix/casedb/policies/case_abac_policy.py
gen_epix/casedb/policies/is_organization_admin_policy.py
gen_epix/casedb/policies/read_organization_results_only_policy.py
gen_epix/casedb/policies/read_self_results_only_policy.py
gen_epix/casedb/repositories/__init__.py
gen_epix/casedb/repositories/abac_dict.py
gen_epix/casedb/repositories/abac_sa.py
gen_epix/casedb/repositories/case_dict.py
gen_epix/casedb/repositories/case_sa.py
gen_epix/casedb/repositories/geo_dict.py
gen_epix/casedb/repositories/geo_sa.py
gen_epix/casedb/repositories/ontology_dict.py
gen_epix/casedb/repositories/ontology_sa.py
gen_epix/casedb/repositories/organization_dict.py
gen_epix/casedb/repositories/organization_sa.py
gen_epix/casedb/repositories/subject_dict.py
gen_epix/casedb/repositories/subject_sa.py
gen_epix/casedb/repositories/sa_model/__init__.py
gen_epix/casedb/repositories/sa_model/abac.py
gen_epix/casedb/repositories/sa_model/case.py
gen_epix/casedb/repositories/sa_model/geo.py
gen_epix/casedb/repositories/sa_model/ontology.py
gen_epix/casedb/repositories/sa_model/subject.py
gen_epix/casedb/services/__init__.py
gen_epix/casedb/services/abac.py
gen_epix/casedb/services/geo.py
gen_epix/casedb/services/ontology.py
gen_epix/casedb/services/organization.py
gen_epix/casedb/services/rbac.py
gen_epix/casedb/services/subject.py
gen_epix/casedb/services/case/__init__.py
gen_epix/casedb/services/case/base.py
gen_epix/casedb/services/case/case.py
gen_epix/casedb/services/case/case_transformer.py
gen_epix/casedb/services/case/create_case.py
gen_epix/casedb/services/case/create_seq.py
gen_epix/casedb/services/case/crud.py
gen_epix/casedb/services/case/read_association_with_valid_ids.py
gen_epix/casedb/services/case/retrieve_case.py
gen_epix/casedb/services/case/retrieve_complete_case_type.py
gen_epix/casedb/services/case/retrieve_seq.py
gen_epix/casedb/services/case/retrieve_stats.py
gen_epix/casedb/services/seqdb/__init__.py
gen_epix/casedb/services/seqdb/remote_app.py
gen_epix/casedb/services/seqdb/service.py
gen_epix/commondb/app.py
gen_epix/commondb/app_impl_details.py
gen_epix/commondb/app_setup.py
gen_epix/commondb/base_env.py
gen_epix/commondb/env.py
gen_epix/commondb/util.py
gen_epix/commondb/api/__init__.py
gen_epix/commondb/api/auth.py
gen_epix/commondb/api/exc.py
gen_epix/commondb/api/organization.py
gen_epix/commondb/api/rbac.py
gen_epix/commondb/api/router.py
gen_epix/commondb/api/system.py
gen_epix/commondb/config/__init__.py
gen_epix/commondb/config/cfg.py
gen_epix/commondb/config/factory.py
gen_epix/commondb/config/settings_manager.py
gen_epix/commondb/domain/__init__.py
gen_epix/commondb/domain/enum.py
gen_epix/commondb/domain/exc.py
gen_epix/commondb/domain/command/__init__.py
gen_epix/commondb/domain/command/abac.py
gen_epix/commondb/domain/command/base.py
gen_epix/commondb/domain/command/organization.py
gen_epix/commondb/domain/command/rbac.py
gen_epix/commondb/domain/command/system.py
gen_epix/commondb/domain/model/__init__.py
gen_epix/commondb/domain/model/abac.py
gen_epix/commondb/domain/model/base.py
gen_epix/commondb/domain/model/organization.py
gen_epix/commondb/domain/model/system.py
gen_epix/commondb/domain/policy/__init__.py
gen_epix/commondb/domain/policy/abac.py
gen_epix/commondb/domain/policy/permission.py
gen_epix/commondb/domain/policy/rbac.py
gen_epix/commondb/domain/policy/system.py
gen_epix/commondb/domain/repository/__init__.py
gen_epix/commondb/domain/repository/abac.py
gen_epix/commondb/domain/repository/organization.py
gen_epix/commondb/domain/repository/system.py
gen_epix/commondb/domain/service/__init__.py
gen_epix/commondb/domain/service/abac.py
gen_epix/commondb/domain/service/organization.py
gen_epix/commondb/domain/service/rbac.py
gen_epix/commondb/domain/service/system.py
gen_epix/commondb/domain/service/user_manager.py
gen_epix/commondb/policies/__init__.py
gen_epix/commondb/policies/has_system_outage_policy.py
gen_epix/commondb/policies/is_organization_admin_policy.py
gen_epix/commondb/policies/read_organization_results_only_policy.py
gen_epix/commondb/policies/read_self_results_only_policy.py
gen_epix/commondb/policies/read_user_policy.py
gen_epix/commondb/policies/update_user_policy.py
gen_epix/commondb/repositories/__init__.py
gen_epix/commondb/repositories/abac_dict.py
gen_epix/commondb/repositories/abac_sa.py
gen_epix/commondb/repositories/organization_dict.py
gen_epix/commondb/repositories/organization_sa.py
gen_epix/commondb/repositories/system_dict.py
gen_epix/commondb/repositories/system_sa.py
gen_epix/commondb/repositories/sa_model/__init__.py
gen_epix/commondb/repositories/sa_model/abac.py
gen_epix/commondb/repositories/sa_model/base.py
gen_epix/commondb/repositories/sa_model/organization.py
gen_epix/commondb/repositories/sa_model/system.py
gen_epix/commondb/repositories/sa_model/util.py
gen_epix/commondb/services/__init__.py
gen_epix/commondb/services/abac.py
gen_epix/commondb/services/organization.py
gen_epix/commondb/services/rbac.py
gen_epix/commondb/services/system.py
gen_epix/commondb/services/user_manager.py
gen_epix/commondb/test/endpoint_test_client.py
gen_epix/commondb/test/enum.py
gen_epix/commondb/test/test_client.py
gen_epix/commondb/test/util.py
gen_epix/fastapp/__init__.py
gen_epix/fastapp/app.py
gen_epix/fastapp/enum.py
gen_epix/fastapp/exc.py
gen_epix/fastapp/log.py
gen_epix/fastapp/model.py
gen_epix/fastapp/pdp.py
gen_epix/fastapp/remote_app.py
gen_epix/fastapp/repository.py
gen_epix/fastapp/service.py
gen_epix/fastapp/unit_of_work.py
gen_epix/fastapp/user_manager.py
gen_epix/fastapp/util.py
gen_epix/fastapp/api/__init__.py
gen_epix/fastapp/api/crud_endpoint_generator.py
gen_epix/fastapp/api/crud_endpoint_set.py
gen_epix/fastapp/api/exc.py
gen_epix/fastapp/api/openapi.py
gen_epix/fastapp/domain/__init__.py
gen_epix/fastapp/domain/domain.py
gen_epix/fastapp/domain/entity.py
gen_epix/fastapp/domain/key.py
gen_epix/fastapp/domain/link.py
gen_epix/fastapp/domain/util.py
gen_epix/fastapp/middleware/__init__.py
gen_epix/fastapp/middleware/handle_auth_exception.py
gen_epix/fastapp/middleware/handle_no_response.py
gen_epix/fastapp/middleware/limiter.py
gen_epix/fastapp/middleware/update_response_header.py
gen_epix/fastapp/repositories/__init__.py
gen_epix/fastapp/repositories/dict/__init__.py
gen_epix/fastapp/repositories/dict/repository.py
gen_epix/fastapp/repositories/dict/unit_of_work.py
gen_epix/fastapp/repositories/sa/__init__.py
gen_epix/fastapp/repositories/sa/engine_factory.py
gen_epix/fastapp/repositories/sa/mapper.py
gen_epix/fastapp/repositories/sa/repository.py
gen_epix/fastapp/repositories/sa/unit_of_work.py
gen_epix/fastapp/repositories/sa/util.py
gen_epix/fastapp/services/__init__.py
gen_epix/fastapp/services/auth/__init__.py
gen_epix/fastapp/services/auth/base.py
gen_epix/fastapp/services/auth/command.py
gen_epix/fastapp/services/auth/idp_client.py
gen_epix/fastapp/services/auth/literal.py
gen_epix/fastapp/services/auth/mock_idp_client.py
gen_epix/fastapp/services/auth/model.py
gen_epix/fastapp/services/auth/oauth_idp_client.py
gen_epix/fastapp/services/auth/service.py
gen_epix/fastapp/services/auth/util.py
gen_epix/fastapp/services/rbac/__init__.py
gen_epix/fastapp/services/rbac/policy.py
gen_epix/fastapp/services/rbac/service.py
gen_epix/fastapp/services/remote/__init__.py
gen_epix/fastapp/services/remote/service.py
gen_epix/filter/__init__.py
gen_epix/filter/base.py
gen_epix/filter/composite.py
gen_epix/filter/date_range.py
gen_epix/filter/datetime_range.py
gen_epix/filter/enum.py
gen_epix/filter/equals.py
gen_epix/filter/equals_boolean.py
gen_epix/filter/equals_number.py
gen_epix/filter/equals_string.py
gen_epix/filter/equals_uuid.py
gen_epix/filter/exists.py
gen_epix/filter/hashable_set.py
gen_epix/filter/no_filter.py
gen_epix/filter/number_range.py
gen_epix/filter/number_set.py
gen_epix/filter/partial_date_range.py
gen_epix/filter/range.py
gen_epix/filter/regex.py
gen_epix/filter/string_set.py
gen_epix/filter/uuid_set.py
gen_epix/omopdb/__init__.py
gen_epix/omopdb/app.py
gen_epix/omopdb/env.py
gen_epix/omopdb/api/__init__.py
gen_epix/omopdb/api/omop.py
gen_epix/omopdb/api/organization.py
gen_epix/omopdb/api/router.py
gen_epix/omopdb/config/__init__.py
gen_epix/omopdb/domain/__init__.py
gen_epix/omopdb/domain/enum.py
gen_epix/omopdb/domain/exc.py
gen_epix/omopdb/domain/command/__init__.py
gen_epix/omopdb/domain/command/omop.py
gen_epix/omopdb/domain/model/__init__.py
gen_epix/omopdb/domain/model/base.py
gen_epix/omopdb/domain/model/omop/__init__.py
gen_epix/omopdb/domain/model/omop/base.py
gen_epix/omopdb/domain/model/omop/non_persistable.py
gen_epix/omopdb/domain/model/omop/omop.py
gen_epix/omopdb/domain/policy/__init__.py
gen_epix/omopdb/domain/policy/permission.py
gen_epix/omopdb/domain/repository/__init__.py
gen_epix/omopdb/domain/repository/abac.py
gen_epix/omopdb/domain/repository/omop.py
gen_epix/omopdb/domain/service/__init__.py
gen_epix/omopdb/domain/service/abac.py
gen_epix/omopdb/domain/service/omop.py
gen_epix/omopdb/policies/__init__.py
gen_epix/omopdb/policies/is_organization_admin_policy.py
gen_epix/omopdb/policies/read_organization_results_only_policy.py
gen_epix/omopdb/policies/read_self_results_only_policy.py
gen_epix/omopdb/policies/read_user_policy.py
gen_epix/omopdb/policies/update_user_policy.py
gen_epix/omopdb/repositories/__init__.py
gen_epix/omopdb/repositories/abac_dict.py
gen_epix/omopdb/repositories/abac_sa.py
gen_epix/omopdb/repositories/omop_dict.py
gen_epix/omopdb/repositories/omop_sa.py
gen_epix/omopdb/repositories/organization_dict.py
gen_epix/omopdb/repositories/organization_sa.py
gen_epix/omopdb/repositories/sa_model/__init__.py
gen_epix/omopdb/repositories/sa_model/base.py
gen_epix/omopdb/repositories/sa_model/omop.py
gen_epix/omopdb/services/__init__.py
gen_epix/omopdb/services/abac.py
gen_epix/omopdb/services/model_anonymizer.py
gen_epix/omopdb/services/omop.py
gen_epix/omopdb/services/organization.py
gen_epix/omopdb/services/rbac.py
gen_epix/seqdb/__init__.py
gen_epix/seqdb/app.py
gen_epix/seqdb/env.py
gen_epix/seqdb/api/__init__.py
gen_epix/seqdb/api/organization.py
gen_epix/seqdb/api/router.py
gen_epix/seqdb/api/seq.py
gen_epix/seqdb/config/__init__.py
gen_epix/seqdb/domain/__init__.py
gen_epix/seqdb/domain/enum.py
gen_epix/seqdb/domain/exc.py
gen_epix/seqdb/domain/command/__init__.py
gen_epix/seqdb/domain/command/file.py
gen_epix/seqdb/domain/command/seq.py
gen_epix/seqdb/domain/model/__init__.py
gen_epix/seqdb/domain/model/file.py
gen_epix/seqdb/domain/model/seq/__init__.py
gen_epix/seqdb/domain/model/seq/base.py
gen_epix/seqdb/domain/model/seq/metadata.py
gen_epix/seqdb/domain/model/seq/non_persistable.py
gen_epix/seqdb/domain/model/seq/persistable.py
gen_epix/seqdb/domain/policy/__init__.py
gen_epix/seqdb/domain/policy/permission.py
gen_epix/seqdb/domain/repository/__init__.py
gen_epix/seqdb/domain/repository/file.py
gen_epix/seqdb/domain/repository/seq.py
gen_epix/seqdb/domain/service/__init__.py
gen_epix/seqdb/domain/service/abac.py
gen_epix/seqdb/domain/service/file.py
gen_epix/seqdb/domain/service/seq.py
gen_epix/seqdb/policies/__init__.py
gen_epix/seqdb/policies/is_organization_admin_policy.py
gen_epix/seqdb/policies/read_organization_results_only_policy.py
gen_epix/seqdb/policies/read_self_results_only_policy.py
gen_epix/seqdb/policies/read_user_policy.py
gen_epix/seqdb/policies/update_user_policy.py
gen_epix/seqdb/repositories/__init__.py
gen_epix/seqdb/repositories/abac_dict.py
gen_epix/seqdb/repositories/abac_sa.py
gen_epix/seqdb/repositories/file_dict.py
gen_epix/seqdb/repositories/file_sa.py
gen_epix/seqdb/repositories/organization_dict.py
gen_epix/seqdb/repositories/organization_sa.py
gen_epix/seqdb/repositories/seq_dict.py
gen_epix/seqdb/repositories/seq_sa.py
gen_epix/seqdb/repositories/sa_model/__init__.py
gen_epix/seqdb/repositories/sa_model/base.py
gen_epix/seqdb/repositories/sa_model/file.py
gen_epix/seqdb/repositories/sa_model/seq.py
gen_epix/seqdb/services/__init__.py
gen_epix/seqdb/services/abac.py
gen_epix/seqdb/services/file.py
gen_epix/seqdb/services/organization.py
gen_epix/seqdb/services/rbac.py
gen_epix/seqdb/services/seq.py
gen_epix/transform/__init__.py
gen_epix/transform/adapter.py
gen_epix/transform/enum.py
gen_epix/transform/examples.py
gen_epix/transform/pipeline.py
gen_epix/transform/registry.py
gen_epix/transform/stream_processer.py
gen_epix/transform/streaming.py
gen_epix/transform/streaming_pipeline.py
gen_epix/transform/transform_result.py
gen_epix/transform/transformer.py
gen_epix/transform/transformers/__init__.py
gen_epix/transform/transformers/conditional.py
gen_epix/transform/transformers/field.py
gen_epix/transform/transformers/interval.py
gen_epix/transform/transformers/iso_time.py
gen_epix/transform/transformers/multi_field.py
gen_epix/transform/transformers/object.py
gen_epix/transform/transformers/tuple_map.py
gen_epix/transform/transformers/validation.py