LICENSE
MANIFEST.in
README.md
master-test.sh
requirements.txt
setup.py
docs/EXAMPLES.rst
docs/Makefile
docs/TODO.rst
docs/build.sh
docs/conf.py
docs/gemini.ai
docs/gemini.png
docs/index.rst
docs/_static/labibi.css
docs/_static/labibi.js
docs/content/acknowledgements.rst
docs/content/api.rst
docs/content/browser.rst
docs/content/caveats.rst
docs/content/database_schema.rst
docs/content/faq.rst
docs/content/functional_annotation.rst
docs/content/history.rst
docs/content/installation.rst
docs/content/loading.rst
docs/content/other.rst
docs/content/querying.rst
docs/content/quick_start.rst
docs/content/tools.rst
docs/images/browser-query.png
docs/images/overview.png
docs/templates/layout.html
docs/templates/page.html
docs/templates/sidebar-intro.html
docs/themes/rtd/theme.conf
docs/themes/rtd/static/rtd.css_t
geminisqlite/GeminiQuery.py
geminisqlite/__init__.py
geminisqlite/anno_info.py
geminisqlite/annotations.py
geminisqlite/compression.py
geminisqlite/config.py
geminisqlite/database.py
geminisqlite/dgidb.py
geminisqlite/func_impact.py
geminisqlite/gemini_actionable_mutations.py
geminisqlite/gemini_amend.py
geminisqlite/gemini_annotate.py
geminisqlite/gemini_browser.py
geminisqlite/gemini_constants.py
geminisqlite/gemini_dbinfo.py
geminisqlite/gemini_dump.py
geminisqlite/gemini_inheritance_model_utils.py
geminisqlite/gemini_load.py
geminisqlite/gemini_load_chunk.py
geminisqlite/gemini_main.py
geminisqlite/gemini_merge_chunks.py
geminisqlite/gemini_plot.py
geminisqlite/gemini_query.py
geminisqlite/gemini_region.py
geminisqlite/gemini_set_somatic.py
geminisqlite/gemini_stats.py
geminisqlite/gemini_subjects.py
geminisqlite/gemini_update.py
geminisqlite/gemini_utils.py
geminisqlite/gemini_windower.py
geminisqlite/gene_table.py
geminisqlite/infotag.py
geminisqlite/install-data.py
geminisqlite/ped.py
geminisqlite/popgen.py
geminisqlite/severe_impact.py
geminisqlite/snpEff.py
geminisqlite/sql.py
geminisqlite/sql_extended.py
geminisqlite/sql_utils.py
geminisqlite/stats.py
geminisqlite/structural_variants.py
geminisqlite/tool_autosomal_dominant.py
geminisqlite/tool_autosomal_recessive.py
geminisqlite/tool_burden_tests.py
geminisqlite/tool_compound_hets.py
geminisqlite/tool_de_novo_mutations.py
geminisqlite/tool_fusions.py
geminisqlite/tool_homozygosity_runs.py
geminisqlite/tool_interactions.py
geminisqlite/tool_lof_sieve.py
geminisqlite/tool_pathways.py
geminisqlite/vep.py
geminisqlite/version.py
geminisqlite.egg-info/PKG-INFO
geminisqlite.egg-info/SOURCES.txt
geminisqlite.egg-info/dependency_links.txt
geminisqlite.egg-info/not-zip-safe
geminisqlite.egg-info/requires.txt
geminisqlite.egg-info/top_level.txt
geminisqlite/data/__init__.py
geminisqlite/scripts/__init__.py
geminisqlite/scripts/gemini_install.py
geminisqlite/scripts/geminisqlite