MANIFEST.in
README.md
setup.cfg
setup.py
GelReportModels.egg-info/PKG-INFO
GelReportModels.egg-info/SOURCES.txt
GelReportModels.egg-info/dependency_links.txt
GelReportModels.egg-info/requires.txt
GelReportModels.egg-info/top_level.txt
bin/ModelValidator
protocols/__init__.py
protocols/coverage_0_1_0.py
protocols/cva_1_0_0.py
protocols/cva_1_1_0.py
protocols/cva_1_3_0.py
protocols/cva_1_3_1.py
protocols/cva_1_4_0.py
protocols/cva_1_5_0.py
protocols/cva_1_5_1.py
protocols/cva_1_5_2.py
protocols/ga4gh_3_0_0.py
protocols/ga4gh_3_1_0.py
protocols/metrics_1_0_0.py
protocols/metrics_1_0_1.py
protocols/metrics_1_1_0.py
protocols/metrics_1_2_0.py
protocols/metrics_1_2_1.py
protocols/metrics_1_2_2.py
protocols/opencb_1_2_0.py
protocols/opencb_1_3_0.py
protocols/participant_1_0_0.py
protocols/participant_1_0_1.py
protocols/participant_1_0_3.py
protocols/participant_1_1_0.py
protocols/participant_1_1_1.py
protocols/participant_1_1_2.py
protocols/participant_1_1_3.py
protocols/participant_1_2_0.py
protocols/participant_1_3_0.py
protocols/protocol.py
protocols/reports_2_1_0.py
protocols/reports_3_0_0.py
protocols/reports_4_0_0.py
protocols/reports_4_2_0.py
protocols/reports_5_0_0.py
protocols/reports_6_0_0.py
protocols/reports_6_0_1.py
protocols/reports_6_0_2.py
protocols/reports_6_1_0.py
protocols/reports_6_1_1.py
protocols/reports_6_2_0.py
protocols/system_0_1_0.py
protocols/catalog_variable_set/v7.3/FamilySelection.catalog_vs.json
protocols/catalog_variable_set/v7.3/GermlineSample.catalog_vs.json
protocols/catalog_variable_set/v7.3/Pedigree.catalog_vs.json
protocols/catalog_variable_set/v7.3/RareDiseaseInterpretationStatu.catalog_vs.json
protocols/catalog_variable_set/v7.3/Referral.catalog_vs.json
protocols/catalog_variable_set/v7.3/ReportedVsGeneticCheck.catalog_vs.json
protocols/catalog_variable_set/v7.3/TumourSample.catalog_vs.json
protocols/catalog_variable_set/v7.6/metrics/FamilySelection.catalog_vs.json
protocols/catalog_variable_set/v7.6/metrics/RareDiseaseInterpretationStatu.catalog_vs.json
protocols/catalog_variable_set/v7.6/metrics/ReportedVsGeneticCheck.catalog_vs.json
protocols/migration/__init__.py
protocols/migration/base_migration.py
protocols/migration/migration_helpers.py
protocols/migration/migration_participant_100_to_participant_103.py
protocols/migration/migration_participant_100_to_reports_300.py
protocols/migration/migration_participant_101_to_reports_300.py
protocols/migration/migration_participant_103_to_participant_100.py
protocols/migration/migration_participant_103_to_participant_110.py
protocols/migration/migration_participant_110_to_participant_100.py
protocols/migration/migration_participant_112_to_participant_113.py
protocols/migration/migration_participant_120_to_participant_130.py
protocols/migration/migration_reports_210_to_reports_300.py
protocols/migration/migration_reports_300_to_participant_100.py
protocols/migration/migration_reports_300_to_reports_400.py
protocols/migration/migration_reports_400_to_reports_300.py
protocols/migration/migration_reports_400_to_reports_500.py
protocols/migration/migration_reports_4_0_0_to_reports_5_0_0.py
protocols/migration/migration_reports_500_to_reports_400.py
protocols/migration/migration_reports_500_to_reports_600.py
protocols/migration/migration_reports_600_to_reports_500.py
protocols/migration/migration_reports_600_to_reports_601.py
protocols/migration/migration_reports_601_to_reports_600.py
protocols/migration/migration_reports_601_to_reports_602.py
protocols/migration/migration_reports_610_to_reports_611.py
protocols/migration/migration_reports_611_to_reports_620.py
protocols/migration/model_validator.py
protocols/migration/participants.py
protocols/protocol_1_0_0-metrics/__init__.py
protocols/protocol_1_0_0-metrics/metrics.py
protocols/protocol_1_2_0-opencb/__init__.py
protocols/protocol_1_2_0-opencb/opencb.py
protocols/protocol_2_1_0/__init__.py
protocols/protocol_2_1_0/reports.py
protocols/protocol_3_0_0/__init__.py
protocols/protocol_3_0_0/reports.py
protocols/protocol_4_0_0/__init__.py
protocols/protocol_4_0_0/ga4gh.py
protocols/protocol_4_0_0/metrics.py
protocols/protocol_4_0_0/participant.py
protocols/protocol_4_0_0/reports.py
protocols/protocol_4_1/__init__.py
protocols/protocol_4_1/participant.py
protocols/protocol_5_0_0/__init__.py
protocols/protocol_5_0_0/ga4gh.py
protocols/protocol_5_0_0/metrics.py
protocols/protocol_5_0_0/opencb.py
protocols/protocol_5_0_0/participant.py
protocols/protocol_5_0_0/reports.py
protocols/protocol_6_1/__init__.py
protocols/protocol_6_1/coverage.py
protocols/protocol_6_1/cva.py
protocols/protocol_6_1/ga4gh.py
protocols/protocol_6_1/metrics.py
protocols/protocol_6_1/opencb.py
protocols/protocol_6_1/participant.py
protocols/protocol_6_1/reports.py
protocols/protocol_6_1/system.py
protocols/protocol_7_0/__init__.py
protocols/protocol_7_0/coverage.py
protocols/protocol_7_0/cva.py
protocols/protocol_7_0/ga4gh.py
protocols/protocol_7_0/metrics.py
protocols/protocol_7_0/opencb.py
protocols/protocol_7_0/participant.py
protocols/protocol_7_0/reports.py
protocols/protocol_7_0/system.py
protocols/protocol_7_2/__init__.py
protocols/protocol_7_2/coverage.py
protocols/protocol_7_2/cva.py
protocols/protocol_7_2/ga4gh.py
protocols/protocol_7_2/metrics.py
protocols/protocol_7_2/opencb.py
protocols/protocol_7_2/participant.py
protocols/protocol_7_2/reports.py
protocols/protocol_7_2/system.py
protocols/protocol_7_2_1/__init__.py
protocols/protocol_7_2_1/coverage.py
protocols/protocol_7_2_1/cva.py
protocols/protocol_7_2_1/ga4gh.py
protocols/protocol_7_2_1/metrics.py
protocols/protocol_7_2_1/opencb.py
protocols/protocol_7_2_1/participant.py
protocols/protocol_7_2_1/reports.py
protocols/protocol_7_2_1/system.py
protocols/protocol_7_3/__init__.py
protocols/protocol_7_3/coverage.py
protocols/protocol_7_3/cva.py
protocols/protocol_7_3/ga4gh.py
protocols/protocol_7_3/metrics.py
protocols/protocol_7_3/opencb.py
protocols/protocol_7_3/participant.py
protocols/protocol_7_3/reports.py
protocols/protocol_7_3/system.py
protocols/protocol_7_4/__init__.py
protocols/protocol_7_4/coverage.py
protocols/protocol_7_4/cva.py
protocols/protocol_7_4/ga4gh.py
protocols/protocol_7_4/metrics.py
protocols/protocol_7_4/opencb.py
protocols/protocol_7_4/participant.py
protocols/protocol_7_4/reports.py
protocols/protocol_7_4/system.py
protocols/protocol_7_6/__init__.py
protocols/protocol_7_6/coverage.py
protocols/protocol_7_6/cva.py
protocols/protocol_7_6/ga4gh.py
protocols/protocol_7_6/metrics.py
protocols/protocol_7_6/opencb.py
protocols/protocol_7_6/participant.py
protocols/protocol_7_6/reports.py
protocols/protocol_7_6/system.py
protocols/protocol_7_7/__init__.py
protocols/protocol_7_7/coverage.py
protocols/protocol_7_7/cva.py
protocols/protocol_7_7/ga4gh.py
protocols/protocol_7_7/metrics.py
protocols/protocol_7_7/opencb.py
protocols/protocol_7_7/participant.py
protocols/protocol_7_7/reports.py
protocols/protocol_7_7/system.py
protocols/protocol_7_8/__init__.py
protocols/protocol_7_8/coverage.py
protocols/protocol_7_8/cva.py
protocols/protocol_7_8/ga4gh.py
protocols/protocol_7_8/metrics.py
protocols/protocol_7_8/opencb.py
protocols/protocol_7_8/participant.py
protocols/protocol_7_8/reports.py
protocols/protocol_7_8/system.py
protocols/resources/builds.json
protocols/tests/__init__.py
protocols/tests/test_protocol.py
protocols/tests/test_migration/__init__.py
protocols/tests/test_migration/base_test_migration.py
protocols/tests/test_migration/migration_runner.py
protocols/tests/test_migration/test_migration.py
protocols/tests/test_migration/test_migration_helpers.py
protocols/tests/test_migration/test_migration_participant_110_to_participant_100.py
protocols/tests/test_migration/test_migration_participant_112_to_participant_113.py
protocols/tests/test_migration/test_migration_participant_120_to_participant_130.py
protocols/tests/test_migration/test_migration_reports_210_to_reports_300.py
protocols/tests/test_migration/test_migration_reports_300_to_participant_100.py
protocols/tests/test_migration/test_migration_reports_300_to_reports_400.py
protocols/tests/test_migration/test_migration_reports_400_to_reports_300.py
protocols/tests/test_migration/test_migration_reports_400_to_reports_500.py
protocols/tests/test_migration/test_migration_reports_500_to_reports_300.py
protocols/tests/test_migration/test_migration_reports_500_to_reports_400.py
protocols/tests/test_migration/test_migration_reports_500_to_reports_600.py
protocols/tests/test_migration/test_migration_reports_600_to_reports_500.py
protocols/tests/test_migration/test_migration_reports_601_to_reports_600.py
protocols/tests/test_migration/test_migration_reports_601_to_reports_602.py
protocols/tests/test_migration/test_migration_reports_610_to_reports_611.py
protocols/tests/test_migration/test_migration_reports_611_to_reports_620.py
protocols/tests/test_migration/test_migration_reports_cancer_400_to_600_to_400.py
protocols/tests/test_migration/test_migration_reports_rd_210_to_600_to_300.py
protocols/tests/test_migration/test_migration_reports_rd_300_to_600_to_300.py
protocols/tests/test_migration/test_participants.py
protocols/tests/test_util/__init__.py
protocols/tests/test_util/test_dependency_manager.py
protocols/tests/test_util/test_factories.py
protocols/util/__init__.py
protocols/util/avro_schema.py
protocols/util/avro_util.py
protocols/util/dependency_manager.py
protocols/util/singleton.py
protocols/util/factories/__init__.py
protocols/util/factories/avro_factory.py
protocols/util/factories/ga4gh_factories.py
protocols/util/factories/participant_1_0_0_factories.py
protocols/util/factories/reports_3_0_0_factories.py
protocols/util/factories/reports_4_3_0_factories.py
protocols_utils/__init__.py
protocols_utils/code_generation/__init__.py
protocols_utils/code_generation/avrotools.py
protocols_utils/code_generation/process_schemas.py
protocols_utils/code_generation/test_process_schemas.py
protocols_utils/code_generation/utils.py
protocols_utils/code_generation/test/__init__.py
protocols_utils/utils/__init__.py
protocols_utils/utils/abstract_migration_test_real_data.py
protocols_utils/utils/conversion_tools.py
protocols_utils/utils/migration_test_real_data_cancer.py
protocols_utils/utils/migration_test_real_data_rd.py
resources/__init__.py