CITATION.cff
LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.py
gecco/__init__.py
gecco/__main__.py
gecco/_base.py
gecco/_meta.py
gecco/model.py
gecco/orf.py
gecco/py.typed
gecco/refine.py
gecco.egg-info/PKG-INFO
gecco.egg-info/SOURCES.txt
gecco.egg-info/dependency_links.txt
gecco.egg-info/entry_points.txt
gecco.egg-info/requires.txt
gecco.egg-info/top_level.txt
gecco/cli/__init__.py
gecco/cli/_log.py
gecco/cli/_utils.py
gecco/cli/commands/__init__.py
gecco/cli/commands/__main__.py
gecco/cli/commands/_common.py
gecco/cli/commands/_parser.py
gecco/cli/commands/annotate.py
gecco/cli/commands/convert.py
gecco/cli/commands/cv.py
gecco/cli/commands/predict.py
gecco/cli/commands/run.py
gecco/cli/commands/train.py
gecco/crf/__init__.py
gecco/crf/cv.py
gecco/crf/features.py
gecco/crf/model.pkl
gecco/crf/model.pkl.md5
gecco/crf/select.py
gecco/hmmer/Pfam.ini
gecco/hmmer/__init__.py
gecco/interpro/__init__.py
gecco/interpro/interpro.json
gecco/types/__init__.py
gecco/types/binarizer.py
gecco/types/compositions.npz
gecco/types/domains.tsv
gecco/types/types.tsv
static/gecco.png
tests/test_doctest.py