setup.cfg
setup.py
GCAP.egg-info/PKG-INFO
GCAP.egg-info/SOURCES.txt
GCAP.egg-info/dependency_links.txt
GCAP.egg-info/requires.txt
GCAP.egg-info/top_level.txt
gcap/GCAP
gcap/__init__.py
gcap/funcs/__init__.py
gcap/funcs/config.py
gcap/funcs/dnase_stat.py
gcap/funcs/filter.py
gcap/funcs/helpers.py
gcap/funcs/json_collection.py
gcap/funcs/mapping.py
gcap/funcs/peaks_calling.py
gcap/funcs/sequence_quality.py
gcap/glue/broadPeak.as
gcap/glue/dac_bam_pe_post_filter
gcap/glue/dac_bam_se_post_filter
gcap/glue/dac_pbc
gcap/glue/dac_pe_read_quality
gcap/glue/dac_se_read_quality
gcap/glue/dac_spot
gcap/glue/eap_broadPeak_to_bigBed
gcap/glue/eap_dnase_stats
gcap/glue/eap_narrowPeak_to_bigBed
gcap/glue/eap_run_bwa_pe
gcap/glue/eap_run_bwa_se
gcap/glue/eap_run_hotspot
gcap/glue/hotspot.py
gcap/glue/narrowPeak.as
gcap/static/gcap.conf.filled
gcap/static/gcap_template.tex
samflow/__init__.py
samflow/command.py
samflow/helper.py
samflow/workflow.py