.gitignore
LICENSE
README.md
SI.ipynb
SI.md
bond_descriptor_ids.png
play.py
pyproject.toml
trunk
.github/workflows/ci.yml
.github/workflows/notebook.yml
.github/workflows/release.yml
.github/workflows/trunk.yml
.trunk/.gitignore
.trunk/trunk.yaml
.trunk/config/.cspell.json
.trunk/config/.flake8
.trunk/config/.isort.cfg
.trunk/config/.markdownlint.yaml
.trunk/config/.yamllint.yaml
.trunk/config/ruff.toml
src/gbigsmiles/.gitignore
src/gbigsmiles/__init__.py
src/gbigsmiles/__main__.py
src/gbigsmiles/_version.py
src/gbigsmiles/atom.py
src/gbigsmiles/bond.py
src/gbigsmiles/chem_resource.py
src/gbigsmiles/core.py
src/gbigsmiles/distribution.py
src/gbigsmiles/forcefield_helper.py
src/gbigsmiles/graph_generate.py
src/gbigsmiles/mixture.py
src/gbigsmiles/mol_gen.py
src/gbigsmiles/mol_prob.py
src/gbigsmiles/molecule.py
src/gbigsmiles/stochastic.py
src/gbigsmiles/stochastic_atom_graph.py
src/gbigsmiles/system.py
src/gbigsmiles/token.py
src/gbigsmiles.egg-info/PKG-INFO
src/gbigsmiles.egg-info/SOURCES.txt
src/gbigsmiles.egg-info/dependency_links.txt
src/gbigsmiles.egg-info/requires.txt
src/gbigsmiles.egg-info/top_level.txt
src/gbigsmiles/data/ffbonded.itp
src/gbigsmiles/data/ffnonbonded.itp
src/gbigsmiles/data/opls.par
tests/__init__.py
tests/test_bond.py
tests/test_distribution.py
tests/test_forcefield.py
tests/test_mixture.py
tests/test_mol_prob.py
tests/test_molecule.py
tests/test_stochastic.py
tests/test_system.py
tests/test_token.py