# Python
__pycache__/
*.py[cod]
*.pyo
*.pyd
*.so
*.pyc

# Virtual environments
.venv/
venv/
ENV/
env/

# Jupyter notebook checkpoints
.ipynb_checkpoints/

# Build artifacts
build/
dist/
*.egg-info/

# IDE
.vscode/
.idea/
*.swp
*.swo
*~

# Coverage / test artifacts
.coverage
.coverage.*
htmlcov/
.pytest_cache/
coverage.xml
.tox/

# Linting / formatting
.ruff_cache/
.mypy_cache/

# Mkdocs build
site/

# FoodSpec runtime outputs (keep examples/ only)
protocol_runs_test/
foodspec_runs/
moats_demo_output/
*_demo_output/
examples/sample_runs/*.h5
examples/sample_runs/*.json
*.foodspec

# Temporary and backup files
*.bak
*.tmp
*.old
*_old.py

# OS generated
.DS_Store
Thumbs.db
*.db
