Metadata-Version: 2.2
Name: flimage
Version: 0.3.3
Summary: library for manipulating fluorescence microscopy series data
Author-email: Paul Müller <dev@craban.de>
License: MIT License
        
        Copyright (c) 2019 Refractive Index Imaging
        
        Permission is hereby granted, free of charge, to any person obtaining a copy
        of this software and associated documentation files (the "Software"), to deal
        in the Software without restriction, including without limitation the rights
        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
        copies of the Software, and to permit persons to whom the Software is
        furnished to do so, subject to the following conditions:
        
        The above copyright notice and this permission notice shall be included in all
        copies or substantial portions of the Software.
        
        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
        SOFTWARE.
        
Project-URL: Homepage, https://github.com/RI-imaging/flimage
Keywords: fluorescence microscopy,bleach correction
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python :: 3
Classifier: Intended Audience :: Science/Research
Requires-Python: <4,>=3.6
Description-Content-Type: text/x-rst
License-File: LICENSE
Requires-Dist: h5py>=2.7.0
Requires-Dist: lmfit>=0.9.8
Requires-Dist: numpy>=1.9.0
Requires-Dist: qpimage>=0.5.1
Requires-Dist: scikit-image>=0.11.0

flimage
=======

|PyPI Version| |Tests Status| |Coverage Status| |Docs Status|


**flimage** is a Python3 library for handling fluorescence data.
Its API is (as much as it makes sense) is identical to that of
`qpimage <https://qpimage.readthedocs.io/en/stable/>`__, making
it a convenient tool for phase- and fluorescence colocalization.


Documentation
-------------

The documentation, including the code reference and examples, is available at
`flimage.readthedocs.io <https://flimage.readthedocs.io/en/stable/>`__.


Installation
------------

::

    pip install flimage


Testing
-------

::

    pip install -e .
    pip install pytest
    pytest tests
    

.. |PyPI Version| image:: https://img.shields.io/pypi/v/flimage.svg
   :target: https://pypi.python.org/pypi/flimage
.. |Tests Status| image:: https://img.shields.io/github/actions/workflow/status/RI-Imaging/flimage/check.yml
   :target: https://github.com/RI-Imaging/flimage/actions?query=workflow%3AChecks
.. |Coverage Status| image:: https://img.shields.io/codecov/c/github/RI-imaging/flimage/master.svg
   :target: https://codecov.io/gh/RI-imaging/flimage
.. |Docs Status| image:: https://readthedocs.org/projects/flimage/badge/?version=latest
   :target: https://readthedocs.org/projects/flimage/builds/

