Metadata-Version: 1.0
Name: fijibin
Version: 0.2.0
Summary: Latest Life-Line version of Fiji for easy inclusion in python projects.
Home-page: https://github.com/arve0/fijibin
Author: Arve Seljebu
Author-email: arve.seljebu@gmail.com
License: MIT
Description: fijibin
        =======
        
        This software will download the latest *Life-Line* version of
        `Fiji <http://fiji.sc/>`__, make the correct cross-platform binary
        available and provide a macro submodule which makes automation of Fiji
        trivial from python.
        
        **Video demo**
        
        |image0|
        
        Current Fiji Life-Line version in this package is **2014 November 25**.
        
        If you experience any trouble with this module, please `submit an
        issue <https://github.com/arve0/fijibin/issues/new>`__ or send a pull
        request on github.
        
        Install
        -------
        
        ::
        
            pip install fijibin
        
        Usage
        -----
        
        .. code:: python
        
            >>> import fijibin
            >>> fijibin.BIN
            '/Users/arve/.bin/Fiji.app/Contents/MacOS/ImageJ-macosx'
            >>> fijibin.FIJI_VERSION
            '20141125'
        
        ``fijibin.BIN`` will point to linux, mac or windows version, depending
        on the operating system detected via
        `platform <https://docs.python.org/3.4/library/platform.html>`__.
        
        Macros
        ~~~~~~
        
        .. code:: python
        
            import fijibin.macro
            macro.run(macro_string_or_list_of_strings)
        
        Refetch binary
        ~~~~~~~~~~~~~~
        
        .. code:: python
        
            >>> from fijibin.fetch import fetch
            >>> fetch()
        
        See more in the `API reference <http://fijibin.readthedocs.org/>`__.
        
        Development
        -----------
        
        Install dependencies and link development version of fijibin to pip:
        
        .. code:: bash
        
            git clone https://github.com/arve0/fijibin
            cd fijibin
            pip install -r requirements.txt
        
        run test
        ~~~~~~~~
        
        .. code:: bash
        
            pip install tox
            tox
        
        extra output, jump into pdb upon error
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        
        .. code:: bash
        
            DEBUG=fijibin tox -- --pdb -s
        
        build api reference
        ~~~~~~~~~~~~~~~~~~~
        
        .. code:: bash
        
            make docs
        
        .. |image0| image:: http://img.youtube.com/vi/v0q88SisBtw/0.jpg
           :target: http://youtu.be/v0q88SisBtw
        
Platform: UNKNOWN
