LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
ficture/__init__.py
ficture/cli.py
ficture.egg-info/PKG-INFO
ficture.egg-info/SOURCES.txt
ficture.egg-info/dependency_links.txt
ficture.egg-info/entry_points.txt
ficture.egg-info/requires.txt
ficture.egg-info/top_level.txt
ficture/loaders/__init__.py
ficture/loaders/data_loader.py
ficture/loaders/pixel_factor_loader.py
ficture/loaders/pixel_loader.py
ficture/loaders/pixel_to_unit_loader.py
ficture/loaders/unit_loader.py
ficture/models/__init__.py
ficture/models/lda_minibatch.py
ficture/models/online_lda.py
ficture/models/online_slda.py
ficture/models/slda_minibatch.py
ficture/scripts/__init__.py
ficture/scripts/choose_color.py
ficture/scripts/de_bulk.py
ficture/scripts/factor_report.py
ficture/scripts/factor_report.template.html
ficture/scripts/filter_boundary.py
ficture/scripts/filter_density.py
ficture/scripts/filter_poly.py
ficture/scripts/init_from_pseudobulk.py
ficture/scripts/init_model_selection.py
ficture/scripts/lda_univ.py
ficture/scripts/make_dge_univ.py
ficture/scripts/make_sge_by_hexagon.py
ficture/scripts/make_spatial_minibatch.py
ficture/scripts/plot_base.py
ficture/scripts/plot_hexagon.py
ficture/scripts/plot_pixel_full.py
ficture/scripts/plot_pixel_multi.py
ficture/scripts/plot_pixel_single.py
ficture/scripts/run_together.py
ficture/scripts/slda_decode.py
ficture/scripts/transform_univ.py
ficture/utils/__init__.py
ficture/utils/filter_fn.py
ficture/utils/hexagon_fn.py
ficture/utils/image_fn.py
ficture/utils/layout_fn.py
ficture/utils/mds_color_circle.py
ficture/utils/minimake.py
ficture/utils/utilt.py
ficture/utils/visualize_factors.py
info/Homo_sapiens.GRCh38.107.names.tsv.gz
info/Mus_musculus.GRCm38.102.names.tsv.gz
info/Mus_musculus.GRCm39.107.names.tsv.gz
info/gencode.human.mouse.combined.gene.types.tsv.gz
info/gencode.human.mouse.combined.gene_names.clean.tsv
info/hiseq.half_right.coordinate_minmax.tsv
info/hiseq.l1.half_right.coordinate_minmax.tsv
info/hiseq.l2.half_right.coordinate_minmax.tsv
info/hiseq.layout.tsv
info/hiseq.tile_list.txt