Metadata-Version: 2.1
Name: fhir2transmart
Version: 0.1.0
Summary: Example FHIR to TranSMART loader
Home-page: https://github.com/thehyve/python_fhir2transmart
Author: Gijs Kant
Author-email: gijs@thehyve.nl
License: GNU General Public License v3 or later
Description: ################################################################################
        Example FHIR to TranSMART loader
        ################################################################################
        
        |Build status| |codecov|
        
        .. |Build status| image:: https://travis-ci.org/thehyve/python_fhir2transmart.svg?branch=master
           :target: https://travis-ci.org/thehyve/python_fhir2transmart/branches
        .. |codecov| image:: https://codecov.io/gh/thehyve/python_fhir2transmart/branch/master/graph/badge.svg
           :target: https://codecov.io/gh/thehyve/python_fhir2transmart
        
        Installation
        ------------
        
        The package requires Python 3.6.
        
        To install ``fhir2transmart``, do:
        
        .. code-block:: console
        
          pip install fhir2transmart
        
        Or from source:
        
        .. code-block:: console
        
          git clone https://github.com/thehyve/python_transmart_loader.git
          cd python_transmart_loader
          pip install .
          cd examples/fhir2transmart
          pip install .
        
        
        Run tests (including coverage) with:
        
        .. code-block:: console
        
          python setup.py test
        
        
        Usage
        -----
        
        Read input from a JSON file ``input.json`` and write the output in transmart-copy
        format to ``/path/to/output``. The output directory should be
        empty of not existing (then it will be created).
        
        .. code-block:: console
        
          python -m fhir2transmart.fhir2transmart input.json /path/to/output
        
        Example data is available at `MITRE SyntheticMass`_.
        
        .. _`MITRE SyntheticMass`: https://syntheticmass.mitre.org/download.html
        
        
        License
        -------
        
        Copyright (c) 2019, The Hyve
        
        This program is free software: you can redistribute it and/or modify
        it under the terms of the GNU General Public License as published by
        the Free Software Foundation, either version 3 of the License, or
        (at your option) any later version.
        
        This program is distributed in the hope that it will be useful,
        but WITHOUT ANY WARRANTY; without even the implied warranty of
        MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
        GNU General Public License for more details.
        
        You should have received a copy of the GNU General Public License
        along with this program.  If not, see <https://www.gnu.org/licenses/>.
        
        
        
Keywords: fhir2transmart
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: GNU General Public License (GPL)
Classifier: Natural Language :: English
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Requires-Python: >=3.6.0
Provides-Extra: dev
