from .data import DataSpec
from .data import CaseCounts, VariantFrequencies, CaseFrequencyData
from .data import HierCases, HierFrequencies, HierarchicalCFData
from .data.data_helpers import *

from .models import ModelSpec
from .models import MultinomialLogisticRegression, HierMLR
from .models import PianthamModel
from .models import InnovationMLR, InnovationSequenceCounts
from .models.renewal_model import *

from .infer import SVIHandler, MCMCHandler #, BlackJaxHandler
from .infer import (
    InferSVI,
    InferMCMC,
    InferFullRank,
    InferMAP,
    InferNUTS,
    #InferBlackJax,
    init_to_MAP,
)

from .posterior import PosteriorHandler, MultiPosterior
from .posterior import get_median, get_quantile, get_quantiles
from .posterior import (
    get_site_by_variant,
    get_freq,
    get_sites_quantiles_json,
    get_sites_variants_json,
    EvofrEncoder,
    save_json,
)
