running pytest
Searching for multiprocess
Best match: multiprocess 0.70.10
Processing multiprocess-0.70.10-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/multiprocess-0.70.10-py3.6.egg
Searching for seaborn
Best match: seaborn 0.10.1
Processing seaborn-0.10.1-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/seaborn-0.10.1-py3.6.egg
Searching for argparse
Best match: argparse 1.4.0
Processing argparse-1.4.0-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/argparse-1.4.0-py3.6.egg
Searching for matplotlib
Best match: matplotlib 3.3.0
Processing matplotlib-3.3.0-py3.6-linux-x86_64.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/matplotlib-3.3.0-py3.6-linux-x86_64.egg
Searching for hypothesis
Best match: hypothesis 5.19.3
Processing hypothesis-5.19.3-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/hypothesis-5.19.3-py3.6.egg
Searching for conda
Best match: conda 4.3.16
Processing conda-4.3.16-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/conda-4.3.16-py3.6.egg
Searching for dill>=0.3.2
Best match: dill 0.3.2
Processing dill-0.3.2-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/dill-0.3.2-py3.6.egg
Searching for scipy>=1.0.1
Best match: scipy 1.5.1
Processing scipy-1.5.1-py3.6-linux-x86_64.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/scipy-1.5.1-py3.6-linux-x86_64.egg
Searching for pillow>=6.2.0
Best match: Pillow 7.2.0
Processing Pillow-7.2.0-py3.6-linux-x86_64.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/Pillow-7.2.0-py3.6-linux-x86_64.egg
Searching for kiwisolver>=1.0.1
Best match: kiwisolver 1.2.0
Processing kiwisolver-1.2.0-py3.6-linux-x86_64.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/kiwisolver-1.2.0-py3.6-linux-x86_64.egg
Searching for cycler>=0.10
Best match: cycler 0.10.0
Processing cycler-0.10.0-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/cycler-0.10.0-py3.6.egg
Searching for sortedcontainers<3.0.0,>=2.1.0
Best match: sortedcontainers 2.2.2
Processing sortedcontainers-2.2.2-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/sortedcontainers-2.2.2-py3.6.egg
Searching for attrs>=19.2.0
Best match: attrs 19.3.0
Processing attrs-19.3.0-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/attrs-19.3.0-py3.6.egg
Searching for ruamel.yaml>=0.11.14
Best match: ruamel.yaml 0.16.10
Processing ruamel.yaml-0.16.10-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/ruamel.yaml-0.16.10-py3.6.egg
Searching for pycosat>=0.6.1
Best match: pycosat 0.6.3
Processing pycosat-0.6.3-py3.6-linux-x86_64.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/pycosat-0.6.3-py3.6-linux-x86_64.egg
Searching for ruamel.yaml.clib>=0.1.2
Best match: ruamel.yaml.clib 0.2.0
Processing ruamel.yaml.clib-0.2.0-py3.6-linux-x86_64.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/ruamel.yaml.clib-0.2.0-py3.6-linux-x86_64.egg
Searching for pytest
Best match: pytest 6.0.0rc1
Processing pytest-6.0.0rc1-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/pytest-6.0.0rc1-py3.6.egg
Searching for toml
Best match: toml 0.10.1
Processing toml-0.10.1-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/toml-0.10.1-py3.6.egg
Searching for py>=1.8.2
Best match: py 1.9.0
Processing py-1.9.0-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/py-1.9.0-py3.6.egg
Searching for pluggy<1.0,>=0.12
Best match: pluggy 0.13.1
Processing pluggy-0.13.1-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/pluggy-0.13.1-py3.6.egg
Searching for more-itertools>=4.0.0
Best match: more-itertools 8.4.0
Processing more_itertools-8.4.0-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/more_itertools-8.4.0-py3.6.egg
Searching for iniconfig
Best match: iniconfig 1.0.0
Processing iniconfig-1.0.0-py3.6.egg

Using /vortexfs1/omics/alexander/akrinos/remodeling/EUKulele/.eggs/iniconfig-1.0.0-py3.6.egg
running egg_info
writing src/EUKulele.egg-info/PKG-INFO
writing dependency_links to src/EUKulele.egg-info/dependency_links.txt
writing requirements to src/EUKulele.egg-info/requires.txt
writing top-level names to src/EUKulele.egg-info/top_level.txt
reading manifest file 'src/EUKulele.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'src/EUKulele.egg-info/SOURCES.txt'
running build_ext
.....                                                                    [100%]
=============================== warnings summary ===============================
tests/code/test_mags.py::test_alignment
  src/EUKulele/visualize_results.py:243: RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`).
    fig = plt.figure(figsize=(15,7.5))

tests/code/test_mags.py: 28 warnings
  <string>:6: DeprecationWarning: Calling nonzero on 0d arrays is deprecated, as it behaves surprisingly. Use `atleast_1d(cond).nonzero()` if the old behavior was intended. If the context of this warning is of the form `arr[nonzero(cond)]`, just use `arr[cond]`.

tests/code/test_mags.py::test_all
  src/EUKulele/visualize_results.py:247: UserWarning: Tight layout not applied. The bottom and top margins cannot be made large enough to accommodate all axes decorations. 
    plt.tight_layout()

-- Docs: https://docs.pytest.org/en/stable/warnings.html
5 passed, 30 warnings in 173.38s (0:02:53)
