.gitignore
.gitorious
.travis.yml
AUTHORS
CHANGELOG
FAQ
INSTALL
LICENSE
MANIFEST.in
NEWS
README
README.rst
THANKS
TODO
VERSION
addons.py
ez_setup.py
setup.py
test_treeko.py
ete2/__init__.py
ete2/_argparse.py
ete2/_ph.py
ete2.egg-info/PKG-INFO
ete2.egg-info/SOURCES.txt
ete2.egg-info/dependency_links.txt
ete2.egg-info/top_level.txt
ete2/clustering/__init__.py
ete2/clustering/clustertree.py
ete2/clustering/clustvalidation.py
ete2/clustering/pstat.py
ete2/clustering/stats.py
ete2/coretype/__init__.py
ete2/coretype/arraytable.py
ete2/coretype/seqgroup.py
ete2/coretype/tree.py
ete2/evol/__init__.py
ete2/evol/control.py
ete2/evol/evoltree.py
ete2/evol/model.py
ete2/evol/utils.py
ete2/evol/parser/__init__.py
ete2/evol/parser/codemlparser.py
ete2/evol/parser/slrparser.py
ete2/nexml/__init__.py
ete2/nexml/_nexml.py
ete2/nexml/_nexml_tree.py
ete2/orthoxml/__init__.py
ete2/orthoxml/_orthoxml.py
ete2/parser/__init__.py
ete2/parser/fasta.py
ete2/parser/newick.py
ete2/parser/paml.py
ete2/parser/phylip.py
ete2/parser/text_arraytable.py
ete2/phylo/__init__.py
ete2/phylo/evolevents.py
ete2/phylo/phylotree.py
ete2/phylo/reconciliation.py
ete2/phylo/spoverlap.py
ete2/phylomedb/__init__.py
ete2/phylomedb/phylomeDB.py
ete2/phylomedb/phylomeDB3.py
ete2/phyloxml/__init__.py
ete2/phyloxml/_phyloxml.py
ete2/phyloxml/_phyloxml_tree.py
ete2/treeview/__init__.py
ete2/treeview/_about.py
ete2/treeview/_mainwindow.py
ete2/treeview/_open_newick.py
ete2/treeview/_search_dialog.py
ete2/treeview/_show_codeml.py
ete2/treeview/_show_newick.py
ete2/treeview/drawer.py
ete2/treeview/ete_resources_rc.py
ete2/treeview/faces.py
ete2/treeview/layouts.py
ete2/treeview/main.py
ete2/treeview/node_gui_actions.py
ete2/treeview/qt4_circular_render.py
ete2/treeview/qt4_face_render.py
ete2/treeview/qt4_gui.py
ete2/treeview/qt4_rect_render.py
ete2/treeview/qt4_render.py
ete2/treeview/svg_colors.py
ete2/treeview/templates.py
ete2/webplugin/__init__.py
ete2/webplugin/webapp.py
scripts/ete2
scripts/etree2orthoxml
test/test_all.py
test/test_arraytable.py
test/test_circ_scale.py
test/test_clustertree.py
test/test_evol.py
test/test_phylomedb3connector.py
test/test_phylotree.py
test/test_r_bindings.py
test/test_scale.py
test/test_seqgroup.py
test/test_tree.py
test/test_treeview.py
test/test_xml_parsers.py