.gitignore
AUTHORS
CHANGELOG
FAQ
INSTALL
LICENSE
MANIFEST.in
NEWS
README
THANKS
TODO
VERSION
addons.py
ez_setup.py
setup.py
doc/ETE.pdf
doc/html/.buildinfo
doc/html/about.html
doc/html/ack.html
doc/html/bugs.html
doc/html/cheatsheet.html
doc/html/genindex.html
doc/html/index.html
doc/html/license.html
doc/html/objects.inv
doc/html/py-modindex.html
doc/html/search.html
doc/html/searchindex.js
doc/html/support.html
doc/html/_downloads/ETE.pdf
doc/html/_downloads/apaf.xml
doc/html/_downloads/face_grid.py
doc/html/_downloads/nexml_annotated_trees.py
doc/html/_downloads/nexml_from_scratch.py
doc/html/_downloads/nexml_parser.py
doc/html/_downloads/phyloxml_from_scratch.py
doc/html/_downloads/phyloxml_parser.py
doc/html/_downloads/species_aware_phylogenies.py
doc/html/_downloads/tolweb.xml
doc/html/_downloads/trees.xml
doc/html/_images/bubble_map.png
doc/html/_images/bubbles_validation.png
doc/html/_images/face_borders.png
doc/html/_images/face_positions.png
doc/html/_images/img_faces.png
doc/html/_images/item_faces.png
doc/html/_images/node_background.png
doc/html/_images/node_style.png
doc/html/_images/node_style_red_and_blue_nodes.png
doc/html/_images/node_style_red_nodes.png
doc/html/_images/phylotree.png
doc/html/_images/profile_faces.png
doc/html/_images/rotated_tree.png
doc/html/_images/scale_x.png
doc/html/_images/scale_y.png
doc/html/_images/semi_circular_tree.png
doc/html/_images/show_info.png
doc/html/_images/svg_colors.png
doc/html/_images/tree_faces.png
doc/html/_sources/about.txt
doc/html/_sources/ack.txt
doc/html/_sources/bugs.txt
doc/html/_sources/cheatsheet.txt
doc/html/_sources/index.txt
doc/html/_sources/license.txt
doc/html/_sources/support.txt
doc/html/_sources/changelog/changelog2.1.txt
doc/html/_sources/changelog/index.txt
doc/html/_sources/faqs/index.txt
doc/html/_sources/install/index.txt
doc/html/_sources/reference/index.txt
doc/html/_sources/reference/reference_clustering.txt
doc/html/_sources/reference/reference_nexml.txt
doc/html/_sources/reference/reference_phylo.txt
doc/html/_sources/reference/reference_phylomedb.txt
doc/html/_sources/reference/reference_phyloxml.txt
doc/html/_sources/reference/reference_seqgroup.txt
doc/html/_sources/reference/reference_svgcolors.txt
doc/html/_sources/reference/reference_tree.txt
doc/html/_sources/reference/reference_treeview.txt
doc/html/_sources/reference/reference_webplugin.txt
doc/html/_sources/tutorial/index.txt
doc/html/_sources/tutorial/tutorial_clustering.txt
doc/html/_sources/tutorial/tutorial_drawing.txt
doc/html/_sources/tutorial/tutorial_nexml.txt
doc/html/_sources/tutorial/tutorial_phylogeny.txt
doc/html/_sources/tutorial/tutorial_phylomedb.txt
doc/html/_sources/tutorial/tutorial_phyloxml.txt
doc/html/_sources/tutorial/tutorial_trees.txt
doc/html/_sources/tutorial/tutorial_webplugin.txt
doc/html/_sources/tutorial/tutorial_xml.txt
doc/html/_static/ajax-loader.gif
doc/html/_static/basic.css
doc/html/_static/comment-bright.png
doc/html/_static/comment-close.png
doc/html/_static/comment.png
doc/html/_static/default.css
doc/html/_static/doctools.js
doc/html/_static/down-pressed.png
doc/html/_static/down.png
doc/html/_static/ete_logo.png
doc/html/_static/favicon.ico
doc/html/_static/file.png
doc/html/_static/jquery.js
doc/html/_static/minus.png
doc/html/_static/plus.png
doc/html/_static/pygments.css
doc/html/_static/searchtools.js
doc/html/_static/sidebar.js
doc/html/_static/underscore.js
doc/html/_static/up-pressed.png
doc/html/_static/up.png
doc/html/_static/websupport.js
doc/html/changelog/changelog2.1.html
doc/html/changelog/index.html
doc/html/faqs/index.html
doc/html/install/index.html
doc/html/reference/index.html
doc/html/reference/reference_clustering.html
doc/html/reference/reference_nexml.html
doc/html/reference/reference_phylo.html
doc/html/reference/reference_phylomedb.html
doc/html/reference/reference_phyloxml.html
doc/html/reference/reference_seqgroup.html
doc/html/reference/reference_svgcolors.html
doc/html/reference/reference_tree.html
doc/html/reference/reference_treeview.html
doc/html/reference/reference_webplugin.html
doc/html/tutorial/index.html
doc/html/tutorial/tutorial_clustering.html
doc/html/tutorial/tutorial_drawing.html
doc/html/tutorial/tutorial_nexml.html
doc/html/tutorial/tutorial_phylogeny.html
doc/html/tutorial/tutorial_phylomedb.html
doc/html/tutorial/tutorial_phyloxml.html
doc/html/tutorial/tutorial_trees.html
doc/html/tutorial/tutorial_webplugin.html
doc/html/tutorial/tutorial_xml.html
ete2/__init__.py
ete2/_argparse.py
ete2/_ph.py
ete2.egg-info/PKG-INFO
ete2.egg-info/SOURCES.txt
ete2.egg-info/dependency_links.txt
ete2.egg-info/top_level.txt
ete2/clustering/__init__.py
ete2/clustering/clustertree.py
ete2/clustering/clustvalidation.py
ete2/clustering/pstat.py
ete2/clustering/stats.py
ete2/coretype/__init__.py
ete2/coretype/arraytable.py
ete2/coretype/seqgroup.py
ete2/coretype/tree.py
ete2/nexml/__init__.py
ete2/nexml/_nexml.py
ete2/nexml/_nexml_tree.py
ete2/orthoxml/__init__.py
ete2/orthoxml/_orthoxml.py
ete2/parser/__init__.py
ete2/parser/fasta.py
ete2/parser/newick.py
ete2/parser/phylip.py
ete2/parser/text_arraytable.py
ete2/phylo/__init__.py
ete2/phylo/evolevents.py
ete2/phylo/phylotree.py
ete2/phylo/reconciliation.py
ete2/phylo/spoverlap.py
ete2/phylomedb/__init__.py
ete2/phylomedb/phylomeDB.py
ete2/phylomedb/phylomeDB3.py
ete2/phyloxml/__init__.py
ete2/phyloxml/_phyloxml.py
ete2/phyloxml/_phyloxml_tree.py
ete2/treeview/OLD_qt4render.py
ete2/treeview/__init__.py
ete2/treeview/_about.py
ete2/treeview/_mainwindow.py
ete2/treeview/_open_newick.py
ete2/treeview/_search_dialog.py
ete2/treeview/_show_newick.py
ete2/treeview/drawer.py
ete2/treeview/ete_resources_rc.py
ete2/treeview/faces.py
ete2/treeview/layouts.py
ete2/treeview/main.py
ete2/treeview/qt4_circular_render.py
ete2/treeview/qt4_face_render.py
ete2/treeview/qt4_gui.py
ete2/treeview/qt4_rect_render.py
ete2/treeview/qt4_render.py
ete2/treeview/svg_colors.py
ete2/treeview/templates.py
ete2/webplugin/__init__.py
ete2/webplugin/webapp.py
scripts/ete2
test/test_all.py
test/test_arraytable.py
test/test_circ_scale.py
test/test_clustertree.py
test/test_phylomedb3connector.py
test/test_phylotree.py
test/test_r_bindings.py
test/test_scale.py
test/test_seqgroup.py
test/test_tree.py
test/test_treeview.py
test/test_xml_parsers.py