Prerequisite
-------------
  * python3.6 or newer (http://www.python.org/getit/releases/2.7/)
  * numpy and scipy (http://numpy.scipy.org/)
  * pyBigWig (https://github.com/deeptools/pyBigWig)
  
Installation using pip 
----------------------
$ pip3 install epiprofile	#do NOT use "pip install epidaurus"

Please note: To avoid name collision, we register "epidaurus" as "epiprofile" on pypi.org, since another pacakge already used "epidaurus".


Run epidaurus
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$ python3 epidaurus.py  CONFIG_FILE  BED_FILE OUT_PREFIX 


Online Manual
-------------
http://epidaurus.sourceforge.net/


Contact
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Liguo Wang, wang.liguo@mayo.edu
