Installation

Prerequisite:
  * gcc (http://gcc.gnu.org/)
  * python2.7 (http://www.python.org/getit/releases/2.7/)
  * numpy (http://numpy.scipy.org/)
  * cython (http://cython.org/)
  * Xcode (https://developer.apple.com/xcode/) Mac OS only. Note: all command line tools need to be installed.

Installation using pip (Please note: To avoid name collision, we register "epidaurus" as "epiprofile" on pypi.org, since another pacakge already used "epidaurus".):

$ pip install epiprofile	#do NOT use "pip install epidaurus", you will install a different pacakge. 

Installation from source code:

$ tar zxf epiprofile-VERSION.tar.gz

$ cd epiprofile-VERSION

$ python setup.py install


Run epidaurus example:

$ python(v2.7) epidaurus.py  CONFIG_FILE  BED_FILE OUT_PREFIX 

Online Manual:

http://epidaurus.sourceforge.net/

Contact:
Liguo Wang, wang.liguo@mayo.edu
