MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
emmer/__init__.py
emmer/main.py
emmer.egg-info/PKG-INFO
emmer.egg-info/SOURCES.txt
emmer.egg-info/dependency_links.txt
emmer.egg-info/entry_points.txt
emmer.egg-info/not-zip-safe
emmer.egg-info/requires.txt
emmer.egg-info/top_level.txt
emmer/include/__init__.py
emmer/include/emmer_utils.py
emmer/include/geckodriver
emmer/include/theoretical_profiles.pickle
emmer/include/confidenceMapUtil/FDRutil.py
emmer/include/confidenceMapUtil/__init__.py
emmer/include/confidenceMapUtil/confidenceMapMain.py
emmer/include/confidenceMapUtil/locscaleUtil.py
emmer/include/confidenceMapUtil/mapUtil.py
emmer/ndimage/__init__.py
emmer/ndimage/average_half_maps.py
emmer/ndimage/compute_real_space_correlation.py
emmer/ndimage/get_center_of_mass.py
emmer/ndimage/map_tools.py
emmer/ndimage/map_utils.py
emmer/ndimage/plotContourMap.py
emmer/ndimage/trim_map_between_residues.py
emmer/ndimage/bfactors/__init__.py
emmer/ndimage/bfactors/estimate_bfactor_distribution.py
emmer/ndimage/bfactors/estimate_bfactor_map.py
emmer/ndimage/bfactors/estimate_local_bfactor.py
emmer/ndimage/contour/__init__.py
emmer/ndimage/contour/contour_utils.py
emmer/ndimage/contour/count_segments.py
emmer/ndimage/contour/surface_area_at_threshold.py
emmer/ndimage/contour/volume_at_threshold.py
emmer/ndimage/contour/volume_matching_threshold.py
emmer/ndimage/filter/__init__.py
emmer/ndimage/filter/apply_fsc_filter.py
emmer/ndimage/filter/band_pass_filter.py
emmer/ndimage/filter/filter_utils.py
emmer/ndimage/filter/high_pass_filter.py
emmer/ndimage/filter/low_pass_filter.py
emmer/ndimage/filter/smoothen_mask.py
emmer/ndimage/fsc/__init__.py
emmer/ndimage/fsc/calculate_fsc_curve.py
emmer/ndimage/fsc/calculate_phase_correlation.py
emmer/ndimage/fsc/compute_fsc_resolution.py
emmer/ndimage/fsc/fsc_utils.py
emmer/ndimage/mask/__init__.py
emmer/ndimage/mask/compute_confidence_map.py
emmer/ndimage/mask/get_atomic_model_mask.py
emmer/ndimage/mask/get_spherical_mask.py
emmer/ndimage/mask/mask_utils.py
emmer/ndimage/plots/__init__.py
emmer/ndimage/plots/plotContourMap.py
emmer/ndimage/plots/plots.py
emmer/ndimage/radial_profile/__init__.py
emmer/ndimage/radial_profile/amplitude_from_resolution.py
emmer/ndimage/radial_profile/compute_radial_amplitude_variance.py
emmer/ndimage/radial_profile/compute_radial_profile.py
emmer/ndimage/radial_profile/estimate_bfactor_pwlf.py
emmer/ndimage/radial_profile/estimate_bfactor_standard.py
emmer/ndimage/radial_profile/frequency_array.py
emmer/ndimage/radial_profile/measure_debye_effect_magnitude.py
emmer/ndimage/radial_profile/merge_two_profiles.py
emmer/ndimage/radial_profile/profile_tools.py
emmer/ndimage/radial_profile/resolution_from_amplitude.py
emmer/ndimage/radial_profile/scale_profiles.py
emmer/ndimage/sharpen/__init__.py
emmer/ndimage/sharpen/scaling_tools.py
emmer/ndimage/sharpen/set_radial_profile_to_volume.py
emmer/ndimage/sharpen/sharpen_maps.py
emmer/ndimage/spectrum/__init__.py
emmer/ndimage/spectrum/spectrum_utils.py
emmer/ndimage/spectrum/sum_of_psd_2d.py
emmer/pdb/__init__.py
emmer/pdb/pdb_utils.py
emmer/pdb/SSE/__init__.py
emmer/pdb/SSE/get_dssp.py
emmer/pdb/SSE/get_secondary_structure_residues_content.py
emmer/pdb/SSE/link_gemmi_model_with_dssp.py
emmer/pdb/SSE/split_gemmi_model_based_on_dssp.py
emmer/pdb/convert/__init__.py
emmer/pdb/convert/convert_cartesian_to_polar.py
emmer/pdb/convert/convert_mrc_to_pdb_position.py
emmer/pdb/convert/convert_pdb_to_map.py
emmer/pdb/convert/convert_pdb_to_mmcif.py
emmer/pdb/convert/convert_pdb_to_mrc_position.py
emmer/pdb/convert/convert_polar_to_cartesian.py
emmer/pdb/coordinates/__init__.py
emmer/pdb/coordinates/get_random_polar_vector.py
emmer/pdb/pdb_tools/__init__.py
emmer/pdb/pdb_tools/add_cryst1_line.py
emmer/pdb/pdb_tools/compute_rmsd_two_pdb.py
emmer/pdb/pdb_tools/find_wilson_cutoff.py
emmer/pdb/pdb_tools/perturb_within_mask.py
emmer/pdb/pdb_tools/shake_pdb_within_mask.py
emmer/tests/__init__.py
emmer/tests/run.py
emmer/tests/test_bfactors.py
emmer/tests/test_convert.py
emmer/tests/test_coordinates.py
emmer/tests/test_dssp.py
emmer/tests/test_filter.py
emmer/tests/test_fsc_maps.py
emmer/tests/test_map_tools.py
emmer/tests/test_map_utils.py
emmer/tests/test_pdb.py
emmer/tests/test_pdb_shake.py
emmer/tests/test_pdb_utils.py
emmer/tests/test_profile_tools.py
emmer/tests/test_surface_area.py
emmer/tests/ndimage_unittest/__init__.py
emmer/tests/pdb_unittest/__init__.py
emmer/tests/pdb_unittest/data/6NY1.pdb
emmer/tests/pdb_unittest/data/__init__.py
emmer/tests/pdb_unittest/data/charged.pdb
emmer/tests/pdb_unittest/data/no_cryst1_line.pdb
emmer/tests/pdb_unittest/data/testing_model.pdb
emmer/tests/pdb_unittest/verify/__init__.py
emmer/tests/pdb_unittest/verify/all_coords.npy
emmer/tests/pdb_unittest/verify/ca_coords.npy
emmer/tests/pdb_unittest/verify/shifted_model.pdb
emmer/tests/pdb_unittest/verify/verify_map.mrc