MANIFEST.in
requirements.txt
requirements_backports.txt
requirements_dxfs.txt
requirements_readline.txt
requirements_setuptools.txt
requirements_test.txt
requirements_windows.txt
setup.cfg
setup.py
dxpy/__init__.py
dxpy/api.py
dxpy/app_builder.py
dxpy/app_categories.py
dxpy/asset_builder.py
dxpy/compat.py
dxpy/dxlog.py
dxpy/exceptions.py
dxpy/executable_builder.py
dxpy/ssh_tunnel_app_support.py
dxpy/toolkit_version.py
dxpy/workflow_builder.py
dxpy.egg-info/PKG-INFO
dxpy.egg-info/SOURCES.txt
dxpy.egg-info/dependency_links.txt
dxpy.egg-info/entry_points.txt
dxpy.egg-info/not-zip-safe
dxpy.egg-info/requires.txt
dxpy.egg-info/top_level.txt
dxpy/bindings/__init__.py
dxpy/bindings/auth.py
dxpy/bindings/download_all_inputs.py
dxpy/bindings/dxanalysis.py
dxpy/bindings/dxapp.py
dxpy/bindings/dxapp_container_functions.py
dxpy/bindings/dxapplet.py
dxpy/bindings/dxdataobject_functions.py
dxpy/bindings/dxfile.py
dxpy/bindings/dxfile_functions.py
dxpy/bindings/dxglobalworkflow.py
dxpy/bindings/dxgtable.py
dxpy/bindings/dxgtable_functions.py
dxpy/bindings/dxjob.py
dxpy/bindings/dxproject.py
dxpy/bindings/dxrecord.py
dxpy/bindings/dxworkflow.py
dxpy/bindings/search.py
dxpy/cli/__init__.py
dxpy/cli/cp.py
dxpy/cli/download.py
dxpy/cli/exec_io.py
dxpy/cli/org.py
dxpy/cli/parsers.py
dxpy/cli/workflow.py
dxpy/packages/__init__.py
dxpy/packages/shlex.py
dxpy/packages/argcomplete/__init__.py
dxpy/packages/argcomplete/completers.py
dxpy/packages/argcomplete/my_argparse.py
dxpy/packages/argcomplete/my_shlex.py
dxpy/scripts/__init__.py
dxpy/scripts/dx.py
dxpy/scripts/dx_app_wizard.py
dxpy/scripts/dx_build_app.py
dxpy/scripts/dx_build_applet.py
dxpy/scripts/dx_build_asset.py
dxpy/scripts/dx_build_report_html.py
dxpy/scripts/dx_genes_to_gff.py
dxpy/scripts/dx_genes_to_gtf.py
dxpy/scripts/dx_mappings_to_fastq.py
dxpy/scripts/dx_mappings_to_sam.py
dxpy/scripts/dx_reads_to_fastq.py
dxpy/scripts/dx_spans_to_bed.py
dxpy/scripts/dx_variants_to_vcf.py
dxpy/templating/__init__.py
dxpy/templating/bash.py
dxpy/templating/python.py
dxpy/templating/utils.py
dxpy/templating/templates/Readme.md
dxpy/templating/templates/bash/basic/dxapp.json
dxpy/templating/templates/bash/basic/src/code.sh
dxpy/templating/templates/bash/parallelized/dxapp.json
dxpy/templating/templates/bash/parallelized/src/code.sh
dxpy/templating/templates/bash/scatter-process-gather/dxapp.json
dxpy/templating/templates/bash/scatter-process-gather/src/code.sh
dxpy/templating/templates/python/basic/dxapp.json
dxpy/templating/templates/python/basic/src/code.py
dxpy/templating/templates/python/basic/test/test.py
dxpy/templating/templates/python/parallelized/dxapp.json
dxpy/templating/templates/python/parallelized/src/code.py
dxpy/templating/templates/python/parallelized/test/test.py
dxpy/templating/templates/python/scatter-process-gather/dxapp.json
dxpy/templating/templates/python/scatter-process-gather/src/code.py
dxpy/templating/templates/python/scatter-process-gather/test/test.py
dxpy/utils/__init__.py
dxpy/utils/batch_utils.py
dxpy/utils/completer.py
dxpy/utils/config.py
dxpy/utils/describe.py
dxpy/utils/exec_utils.py
dxpy/utils/executable_unbuilder.py
dxpy/utils/file_load_utils.py
dxpy/utils/genomic_utils.py
dxpy/utils/job_log_client.py
dxpy/utils/local_exec_utils.py
dxpy/utils/pathmatch.py
dxpy/utils/pretty_print.py
dxpy/utils/printing.py
dxpy/utils/resolver.py
dxpy/utils/spelling_corrector.py
scripts/dx-clone-asset
scripts/dx-docker
scripts/dx-download-all-inputs
scripts/dx-fetch-bundled-depends
scripts/dx-generate-dxapp
scripts/dx-jobutil-add-output
scripts/dx-jobutil-dxlink
scripts/dx-jobutil-new-job
scripts/dx-jobutil-parse-link
scripts/dx-jobutil-report-error
scripts/dx-log-stream
scripts/dx-print-bash-vars
scripts/dx-run-app-locally
scripts/dx-upload-all-outputs
test/test_describe.py
test/test_dx-docker.py
test/test_dx_app_wizard_and_run_app_locally.py
test/test_dx_bash_helpers.py
test/test_dx_completion.py
test/test_dxabs.py
test/test_dxasset.py
test/test_dxclient.py
test/test_dxpy.py
test/test_dxpy_utils.py
test/test_dxunpack.py