LICENSE
README.rst
setup.cfg
setup.py
./dtiplayground/__init__.py
./dtiplayground/config.py
./dtiplayground/api/__init__.py
./dtiplayground/api/application.py
./dtiplayground/api/dmriatlasbuilder.py
./dtiplayground/api/dmriprep.py
./dtiplayground/api/server.py
./dtiplayground/api/utils.py
./dtiplayground/api/static/__init__.py
./dtiplayground/api/static/spa/__init__.py
./dtiplayground/api/static/spa/spa.zip
./dtiplayground/dmri/__init__.py
./dtiplayground/dmri/atlasbuilder/__init__.py
./dtiplayground/dmri/atlasbuilder/app.py
./dtiplayground/dmri/atlasbuilder/atlasbuilder.py
./dtiplayground/dmri/atlasbuilder/utils.py
./dtiplayground/dmri/atlasbuilder/data/GreedyAtlasParameters.xml
./dtiplayground/dmri/atlasbuilder/data/__init__.py
./dtiplayground/dmri/atlasbuilder/data/template.json
./dtiplayground/dmri/common/__init__.py
./dtiplayground/dmri/common/appbase.py
./dtiplayground/dmri/common/dwi.py
./dtiplayground/dmri/common/module.py
./dtiplayground/dmri/common/pipeline.py
./dtiplayground/dmri/common/data/__init__.py
./dtiplayground/dmri/common/data/fslinstaller.py
./dtiplayground/dmri/common/data/fslinstaller_py2.py
./dtiplayground/dmri/common/data/software_paths.yml
./dtiplayground/dmri/common/study/__init__.py
./dtiplayground/dmri/common/study/loaders.py
./dtiplayground/dmri/common/tools/__init__.py
./dtiplayground/dmri/common/tools/base.py
./dtiplayground/dmri/common/tools/brainsfit.py
./dtiplayground/dmri/common/tools/crop_dti.py
./dtiplayground/dmri/common/tools/dti_reg.py
./dtiplayground/dmri/common/tools/dtiaverage.py
./dtiplayground/dmri/common/tools/dtiestim.py
./dtiplayground/dmri/common/tools/dtiprocess.py
./dtiplayground/dmri/common/tools/dtitractstat.py
./dtiplayground/dmri/common/tools/fiberpostprocess.py
./dtiplayground/dmri/common/tools/fiberprocess.py
./dtiplayground/dmri/common/tools/fsl.py
./dtiplayground/dmri/common/tools/greedy_atlas.py
./dtiplayground/dmri/common/tools/image_math.py
./dtiplayground/dmri/common/tools/itk_transform_tools.py
./dtiplayground/dmri/common/tools/niral_utilities.py
./dtiplayground/dmri/common/tools/resample_dti_log_euclidean.py
./dtiplayground/dmri/common/tools/unu.py
./dtiplayground/dmri/fiberprofile/__init__.py
./dtiplayground/dmri/fiberprofile/protocols.py
./dtiplayground/dmri/fiberprofile/modules/__init__.py
./dtiplayground/dmri/fiberprofile/modules/EXTRACT_Profile/EXTRACT_Profile.py
./dtiplayground/dmri/fiberprofile/modules/EXTRACT_Profile/EXTRACT_Profile.yml
./dtiplayground/dmri/fiberprofile/modules/EXTRACT_Profile/__init__.py
./dtiplayground/dmri/fiberprofile/modules/IDENTITY_Process/IDENTITY_Process.py
./dtiplayground/dmri/fiberprofile/modules/IDENTITY_Process/IDENTITY_Process.yml
./dtiplayground/dmri/fiberprofile/modules/IDENTITY_Process/__init__.py
./dtiplayground/dmri/fiberprofile/templates/__init__.py
./dtiplayground/dmri/fiberprofile/templates/module_template.py
./dtiplayground/dmri/fiberprofile/templates/module_template.yml
./dtiplayground/dmri/fiberprofile/templates/protocol_template.yml
./dtiplayground/dmri/playground/__init__.py
./dtiplayground/dmri/playground/app.py
./dtiplayground/dmri/preprocessing/README.md
./dtiplayground/dmri/preprocessing/__init__.py
./dtiplayground/dmri/preprocessing/app.py
./dtiplayground/dmri/preprocessing/protocols.py
./dtiplayground/dmri/preprocessing/data/__init__.py
./dtiplayground/dmri/preprocessing/data/software_paths.yml
./dtiplayground/dmri/preprocessing/modules/__init__.py
./dtiplayground/dmri/preprocessing/modules/BASELINE_Average/BASELINE_Average.py
./dtiplayground/dmri/preprocessing/modules/BASELINE_Average/BASELINE_Average.yml
./dtiplayground/dmri/preprocessing/modules/BASELINE_Average/README.md
./dtiplayground/dmri/preprocessing/modules/BASELINE_Average/__init__.py
./dtiplayground/dmri/preprocessing/modules/BRAIN_Mask/BRAIN_Mask.py
./dtiplayground/dmri/preprocessing/modules/BRAIN_Mask/BRAIN_Mask.yml
./dtiplayground/dmri/preprocessing/modules/BRAIN_Mask/README.md
./dtiplayground/dmri/preprocessing/modules/BRAIN_Mask/__init__.py
./dtiplayground/dmri/preprocessing/modules/BRAIN_Tractography/BRAIN_Tractography.py
./dtiplayground/dmri/preprocessing/modules/BRAIN_Tractography/BRAIN_Tractography.yml
./dtiplayground/dmri/preprocessing/modules/BRAIN_Tractography/README.md
./dtiplayground/dmri/preprocessing/modules/BRAIN_Tractography/__init__.py
./dtiplayground/dmri/preprocessing/modules/DTI_Estimate/DTI_Estimate.py
./dtiplayground/dmri/preprocessing/modules/DTI_Estimate/DTI_Estimate.yml
./dtiplayground/dmri/preprocessing/modules/DTI_Estimate/README.md
./dtiplayground/dmri/preprocessing/modules/DTI_Estimate/__init__.py
./dtiplayground/dmri/preprocessing/modules/DTI_Register/DTI_Register.py
./dtiplayground/dmri/preprocessing/modules/DTI_Register/DTI_Register.yml
./dtiplayground/dmri/preprocessing/modules/DTI_Register/README.md
./dtiplayground/dmri/preprocessing/modules/DTI_Register/__init__.py
./dtiplayground/dmri/preprocessing/modules/EDDYMOTION_Correct/EDDYMOTION_Correct.py
./dtiplayground/dmri/preprocessing/modules/EDDYMOTION_Correct/EDDYMOTION_Correct.yml
./dtiplayground/dmri/preprocessing/modules/EDDYMOTION_Correct/README.md
./dtiplayground/dmri/preprocessing/modules/EDDYMOTION_Correct/__init__.py
./dtiplayground/dmri/preprocessing/modules/IDENTITY_Process/IDENTITY_Process.py
./dtiplayground/dmri/preprocessing/modules/IDENTITY_Process/IDENTITY_Process.yml
./dtiplayground/dmri/preprocessing/modules/IDENTITY_Process/README.md
./dtiplayground/dmri/preprocessing/modules/IDENTITY_Process/__init__.py
./dtiplayground/dmri/preprocessing/modules/IMAGE_Filter/IMAGE_Filter.py
./dtiplayground/dmri/preprocessing/modules/IMAGE_Filter/IMAGE_Filter.yml
./dtiplayground/dmri/preprocessing/modules/IMAGE_Filter/README.md
./dtiplayground/dmri/preprocessing/modules/IMAGE_Filter/__init__.py
./dtiplayground/dmri/preprocessing/modules/INTERLACE_Check/INTERLACE_Check.py
./dtiplayground/dmri/preprocessing/modules/INTERLACE_Check/INTERLACE_Check.yml
./dtiplayground/dmri/preprocessing/modules/INTERLACE_Check/README.md
./dtiplayground/dmri/preprocessing/modules/INTERLACE_Check/__init__.py
./dtiplayground/dmri/preprocessing/modules/MANUAL_Exclude/MANUAL_Exclude.py
./dtiplayground/dmri/preprocessing/modules/MANUAL_Exclude/MANUAL_Exclude.yml
./dtiplayground/dmri/preprocessing/modules/MANUAL_Exclude/README.md
./dtiplayground/dmri/preprocessing/modules/MANUAL_Exclude/__init__.py
./dtiplayground/dmri/preprocessing/modules/QC_Report/QC_Report.py
./dtiplayground/dmri/preprocessing/modules/QC_Report/QC_Report.yml
./dtiplayground/dmri/preprocessing/modules/QC_Report/README.md
./dtiplayground/dmri/preprocessing/modules/QC_Report/__init__.py
./dtiplayground/dmri/preprocessing/modules/SLICE_Check/README.md
./dtiplayground/dmri/preprocessing/modules/SLICE_Check/SLICE_Check.py
./dtiplayground/dmri/preprocessing/modules/SLICE_Check/SLICE_Check.yml
./dtiplayground/dmri/preprocessing/modules/SLICE_Check/__init__.py
./dtiplayground/dmri/preprocessing/modules/SUSCEPTIBILITY_Correct/README.md
./dtiplayground/dmri/preprocessing/modules/SUSCEPTIBILITY_Correct/SUSCEPTIBILITY_Correct.py
./dtiplayground/dmri/preprocessing/modules/SUSCEPTIBILITY_Correct/SUSCEPTIBILITY_Correct.yml
./dtiplayground/dmri/preprocessing/modules/SUSCEPTIBILITY_Correct/__init__.py
./dtiplayground/dmri/preprocessing/modules/SUSCEPTIBILITY_Correct/data/__init__.py
./dtiplayground/dmri/preprocessing/modules/SUSCEPTIBILITY_Correct/data/fsl_regb02b0.cnf
./dtiplayground/dmri/preprocessing/modules/UTIL_Merge/README.md
./dtiplayground/dmri/preprocessing/modules/UTIL_Merge/UTIL_Merge.py
./dtiplayground/dmri/preprocessing/modules/UTIL_Merge/UTIL_Merge.yml
./dtiplayground/dmri/preprocessing/modules/UTIL_Merge/__init__.py
./dtiplayground/dmri/preprocessing/templates/__init__.py
./dtiplayground/dmri/preprocessing/templates/module_template.md
./dtiplayground/dmri/preprocessing/templates/module_template.py
./dtiplayground/dmri/preprocessing/templates/module_template.yml
./dtiplayground/dmri/preprocessing/templates/protocol_template.yml
./dtiplayground/dmri/tractography/__init__.py
./dtiplayground/dmri/tractography/protocols.py
./dtiplayground/dmri/tractography/modules/__init__.py
./dtiplayground/dmri/tractography/templates/__init__.py
./dtiplayground/dmri/tractography/templates/module_template.py
./dtiplayground/dmri/tractography/templates/module_template.yml
./dtiplayground/dmri/tractography/templates/protocol_template.yml
bin/dmriatlas
bin/dmriatlas.py
bin/dmriautotract
bin/dmriautotract.py
bin/dmrifiberprofile
bin/dmrifiberprofile.py
bin/dmriplayground
bin/dmriplayground.py
bin/dmriplaygroundlab
bin/dmriprep
bin/dmriprep.py
dtiplayground.egg-info/PKG-INFO
dtiplayground.egg-info/SOURCES.txt
dtiplayground.egg-info/dependency_links.txt
dtiplayground.egg-info/requires.txt
dtiplayground.egg-info/top_level.txt