dohlee.gene module¶

dohlee.gene.get_first_item(items)[source]¶

Return the first item of items. If ‘items’ is a single value, just return it.

Parameters:	items (list/value) – A list of items or a single value.
Returns:	The first item of items.

dohlee.gene.ensg2symbol(ensembl_ids)[source]¶

Convert Ensembl gene ids into gene symbols.

Parameters:	ensembl_ids (list) – A list of Ensembl IDs to be converted.
Returns:	A list of HGNC symbols, which is the result of best conversion of given Ensembl IDs.

dohlee.gene.symbol2ensg(symbols=None)[source]¶

Convert gene symbols into Ensembl gene ids.

Parameters:	symbols (list) – A list of HGNC symbols to be converted.
Returns:	A list of Ensembl gene symbols(ENSG symbols).

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