Metadata-Version: 2.1
Name: dnctree
Version: 0.1
Summary: Distance-based phylogeny inference using a randomised divide-and-conquer method
Home-page: https://github.com/arvestad/dnctree
Author: Lars Arvestad
Author-email: arve@math.su.se
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires-Python: >=3.5
Description-Content-Type: text/markdown
License-File: LICENSE
Requires-Dist: alv (>=1.5)
Requires-Dist: modelmatcher (>=1.1.3)
Requires-Dist: biopython (>=1.70)
Requires-Dist: ete3 (>=3.1.1)
Requires-Dist: tree-matching-distance

# dnctree: Randomized divide and conquer algorithm for phylogenetic trees

See biorXiv paper about the method.


## Example usage

``` shell
dnctree -f phylip sample_data/L500_sd0.0_WAG_n0.phylip
dnctree --first_triple H32 H14 H0  --verbose --base_case_size 12 -f phylip sample_data/L500_sd0.0_WAG_n0.phylip
```
