LICENSE
README.md
pyproject.toml
setup.py
src/dlomix/__init__.py
src/dlomix/__main__.py
src/dlomix/_metadata.py
src/dlomix/_register_keras.py
src/dlomix/config.py
src/dlomix/constants.py
src/dlomix.egg-info/PKG-INFO
src/dlomix.egg-info/SOURCES.txt
src/dlomix.egg-info/dependency_links.txt
src/dlomix.egg-info/requires.txt
src/dlomix.egg-info/top_level.txt
src/dlomix/callbacks/__init__.py
src/dlomix/callbacks/cyclic_lr.py
src/dlomix/data/__init__.py
src/dlomix/data/charge_state.py
src/dlomix/data/dataset.py
src/dlomix/data/dataset_config.py
src/dlomix/data/dataset_utils.py
src/dlomix/data/detectability.py
src/dlomix/data/fragment_ion_intensity.py
src/dlomix/data/ion_mobility.py
src/dlomix/data/retention_time.py
src/dlomix/data/processing/__init__.py
src/dlomix/data/processing/feature_extractors.py
src/dlomix/data/processing/feature_tables.py
src/dlomix/data/processing/processors.py
src/dlomix/data/processing/pickled_feature_dicts/mz_diff.pkl
src/dlomix/data/processing/pickled_feature_dicts/red_smiles.pkl
src/dlomix/data/processing/pickled_feature_dicts/saved_ac_count.pkl
src/dlomix/data/processing/pickled_feature_dicts/saved_gained_atoms.pkl
src/dlomix/data/processing/pickled_feature_dicts/saved_loss_atoms.pkl
src/dlomix/eval/__init__.py
src/dlomix/eval/chargestate.py
src/dlomix/eval/chargestate_torch.py
src/dlomix/eval/rt_eval.py
src/dlomix/eval/rt_eval_torch.py
src/dlomix/layers/__init__.py
src/dlomix/layers/attention.py
src/dlomix/layers/attention_torch.py
src/dlomix/layers/bi_gru_seq_encoder_torch.py
src/dlomix/layers/gru_seq_decoder_torch.py
src/dlomix/losses/__init__.py
src/dlomix/losses/intensity.py
src/dlomix/losses/intensity_torch.py
src/dlomix/losses/ionmob_torch.py
src/dlomix/models/__init__.py
src/dlomix/models/base.py
src/dlomix/models/chargestate.py
src/dlomix/models/chargestate_torch.py
src/dlomix/models/deepLC.py
src/dlomix/models/detectability.py
src/dlomix/models/detectability_torch.py
src/dlomix/models/ionmob_torch.py
src/dlomix/models/prosit.py
src/dlomix/models/prosit_torch.py
src/dlomix/pipelines/__init__.py
src/dlomix/pipelines/pipeline.py
src/dlomix/reports/DetectabilityReport.py
src/dlomix/reports/IntensityReport.py
src/dlomix/reports/Report.py
src/dlomix/reports/RetentionTimeReport.py
src/dlomix/reports/RetentionTimeReportModelComparisonWandb.py
src/dlomix/reports/RetentionTimeReportRunComparisonWandb.py
src/dlomix/reports/__init__.py
src/dlomix/reports/postprocessing.py
tests/test_datasets.py
tests/test_eval.py
tests/test_feature_extractors.py
tests/test_layers_torch.py
tests/test_losses.py
tests/test_models.py
tests/test_processors.py
tests/test_torch_dataset.py
tests/test_torch_losses.py
tests/test_torch_models.py