Metadata-Version: 1.1
Name: django-galaxy
Version: 0.0.1
Summary: Galaxy interfacing with Django
Home-page: https://mogi.readthedocs.io
Author: Thomas N lawson
Author-email: thomas.nigel.lawson@gmail.com
License: GPLv3
Description: =====
        django-galaxy
        =====
        
        
        |Build Status (Travis)| |Py versions|
        
        
        Django interfacing with Galaxy. Backend using the bioblend API.
        
        `Galaxy <https://galaxyproject.org/>`__ is a web based workflow platform that can be used to perform bioinformatics in a reproducible and sharable environment.
        
        Further documentation available on `ReadTheDocs <https://mogi.readthedocs.io/en/latest/>`__
        
        Quick start
        -----------
        
        1. Add "galaxy" and django application dependencies to your INSTALLED_APPS setting like this (galaxy should come before gfiles)::
        
            INSTALLED_APPS = [
                ...
                'galaxy',
                'gfiles',
        
        
                'django_tables2',
                'bootstrap3',
                'django_tables2_column_shifter',
                'django_sb_admin',
                'django_filter'
            ]
        
        2. Include the polls URLconf in your project urls.py like this::
        
            url(r'^', include('gfiles.urls')),
            url('galaxy/', include('galaxy.urls')),
        
        3. Run `python manage.py migrate` to create the models.
        
        4. Start the development server and visit http://127.0.0.1:8000
        
        5. Register http://127.0.0.1:8000/register/ and login http://127.0.0.1:8000/login/
        
        6. View summary of Galaxy instances and options http://127.0.0.1:8000/galaxy/galaxy_summary/
        
        7. Register Galaxy instance http://127.0.0.1:8000/galaxy/addgi/
        
        8. Register Galaxy user http://127.0.0.1:8000/galaxy/addguser/
        
        9. Upload file(s) to Django (for bulk upload of files see django-misa and django-mogi) http://127.0.0.1:8000/upload_gfile/
        
        10. Upload file(s) to Galaxy data library (for bulk upload of files see django-misa and django-mogi) http://127.0.0.1:8000/galaxy/files_to_galaxy_datalib/
        
        11. Run workflow (for running workflows with ISA data see django-misa and django-mogi) http://127.0.0.1:8000/galaxy/workflow_summary/
        
        12. View histories http://127.0.0.1:8000/galaxy/history_status/
        
        
        .. |Build Status (Travis)| image:: https://travis-ci.com/computational-metabolomics/django-galaxy.svg?branch=master
           :target: https://travis-ci.com/computational-metabolomics/django-galaxy/
        
        .. |Py versions| image:: https://img.shields.io/pypi/pyversions/django-galaxy.svg?style=flat&maxAge=3600
           :target: https://pypi.python.org/pypi/django-galaxy/
Platform: UNKNOWN
Classifier: Environment :: Web Environment
Classifier: Framework :: Django
Classifier: Framework :: Django :: 1.11
Classifier: Intended Audience :: Developers
Classifier: License :: OSI Approved :: GNU General Public License v3 (GPLv3)
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Internet :: WWW/HTTP
Classifier: Topic :: Internet :: WWW/HTTP :: Dynamic Content
