import numpy as np
from dipy.reconst.dsi import DiffusionSpectrumModel
from dipy.data import get_data
from dipy.core.gradients import gradient_table
from numpy.testing import (assert_almost_equal,
                           run_module_suite)
from dipy.reconst.dsi import DiffusionSpectrumModel
from dipy.sims.voxel import (SticksAndBall,
                             MultiTensor)


def test_dsi_metrics():
    btable = np.loadtxt(get_data('dsi4169btable'))
    gtab = gradient_table(btable[:, 0], btable[:, 1:])
    data, golden_directions = SticksAndBall(gtab, d=0.0015, S0=100,
                                            angles=[(0, 0), (60, 0)],
                                            fractions=[50, 50], snr=None)
    data = data / float(data[0])
    dsmodel = DiffusionSpectrumModel(gtab, qgrid_size=21, filter_width=4500)
    rtop_signal_norm = dsmodel.fit(data).rtop_signal()
    rtop_pdf_norm = dsmodel.fit(data).rtop_pdf()
    rtop_pdf = dsmodel.fit(data).rtop_pdf(normalized=False)
    assert_almost_equal(rtop_signal_norm, rtop_pdf, 10)
    mevals = np.array(([0.0015, 0.0003, 0.0003], [0.0015, 0.0003, 0.0003]))
    S_0, sticks_0 = MultiTensor(gtab, mevals, S0=100,
                                angles=[(0, 0), (60, 0)],
                                fractions=[50, 50], snr=None)
    S_1, sticks_0 = MultiTensor(gtab, mevals * 2.0, S0=100,
                                angles=[(0, 0), (60, 0)],
                                fractions=[50, 50], snr=None)
    MSD_norm_0 = dsmodel.fit(S_0).msd_discrete(normalized=True)
    MSD_norm_1 = dsmodel.fit(S_1).msd_discrete(normalized=True)
    assert_almost_equal(MSD_norm_0, 0.5 * MSD_norm_1, 4)


if __name__ == '__main__':
    run_module_suite()
