LICENSE.txt
README.md
pyproject.toml
setup.py
dipwmsearch.egg-info/PKG-INFO
dipwmsearch.egg-info/SOURCES.txt
dipwmsearch.egg-info/dependency_links.txt
dipwmsearch.egg-info/requires.txt
dipwmsearch.egg-info/top_level.txt
src/AhoCorasick.py
src/Enumerate.py
src/SemiNaive.py
src/Super.py
src/__init__.py
src/diPwm.py
src/../data/ATF3_HUMAN.H11DI.0.A.dpwm
src/../data/fasta_example.fa
src/../data/multi_fasta_example.fa
src/../data/sequence.txt
src/../examples/Example_AhoCorasick_Fasta.py
src/../examples/Example_SemiNaive_Fasta.py
src/../examples/Example_SemiNaive_Fasta_Reverse_Complement.py
src/../examples/Example_SemiNaive_Multi_Fasta.py
test/test_Enumerate.py
test/test_SemiNaive.py
test/test_Super.py
test/test_diPWM.py
test/test_diPWM_file.py