MANIFEST.in
README.rst
setup.cfg
setup.py
./.hgignore
./.hgsubtree
./CHANGES
./CMakeLists.txt
./LEGAL.txt
./LICENSE.txt
./MANIFEST.in
./NOTICES.txt
./README.rst
./__init__.py
./pypi.py
./setup.cfg
./setup.py
./tags
./bindings/python/CMakeLists.txt
./bindings/python/chain.h
./bindings/python/cohomology-persistence.cpp
./bindings/python/cohomology-persistence.h
./bindings/python/diagram.cpp
./bindings/python/diagram.h
./bindings/python/dionysus.cpp
./bindings/python/distances.cpp
./bindings/python/field.cpp
./bindings/python/field.h
./bindings/python/filtration.cpp
./bindings/python/filtration.h
./bindings/python/freudenthal.cpp
./bindings/python/omni-field-persistence.cpp
./bindings/python/omni-field-persistence.h
./bindings/python/persistence.cpp
./bindings/python/persistence.h
./bindings/python/rips.cpp
./bindings/python/simplex.cpp
./bindings/python/simplex.h
./bindings/python/zigzag-persistence.cpp
./bindings/python/zigzag-persistence.h
./bindings/python/dionysus/__init__.py
./bindings/python/dionysus/_version.py
./bindings/python/dionysus/_version.pyc
./bindings/python/dionysus/plot.py
./bindings/python/pybind11/CMakeLists.txt
./bindings/python/pybind11/LICENSE
./bindings/python/pybind11/include/pybind11/attr.h
./bindings/python/pybind11/include/pybind11/buffer_info.h
./bindings/python/pybind11/include/pybind11/cast.h
./bindings/python/pybind11/include/pybind11/chrono.h
./bindings/python/pybind11/include/pybind11/class_support.h
./bindings/python/pybind11/include/pybind11/common.h
./bindings/python/pybind11/include/pybind11/complex.h
./bindings/python/pybind11/include/pybind11/descr.h
./bindings/python/pybind11/include/pybind11/eigen.h
./bindings/python/pybind11/include/pybind11/embed.h
./bindings/python/pybind11/include/pybind11/eval.h
./bindings/python/pybind11/include/pybind11/functional.h
./bindings/python/pybind11/include/pybind11/iostream.h
./bindings/python/pybind11/include/pybind11/numpy.h
./bindings/python/pybind11/include/pybind11/operators.h
./bindings/python/pybind11/include/pybind11/options.h
./bindings/python/pybind11/include/pybind11/pybind11.h
./bindings/python/pybind11/include/pybind11/pytypes.h
./bindings/python/pybind11/include/pybind11/stl.h
./bindings/python/pybind11/include/pybind11/stl_bind.h
./bindings/python/pybind11/include/pybind11/typeid.h
./bindings/python/pybind11/include/pybind11/detail/class.h
./bindings/python/pybind11/include/pybind11/detail/common.h
./bindings/python/pybind11/include/pybind11/detail/descr.h
./bindings/python/pybind11/include/pybind11/detail/init.h
./bindings/python/pybind11/include/pybind11/detail/internals.h
./bindings/python/pybind11/include/pybind11/detail/typeid.h
./bindings/python/pybind11/tools/FindCatch.cmake
./bindings/python/pybind11/tools/FindEigen3.cmake
./bindings/python/pybind11/tools/FindPythonLibsNew.cmake
./bindings/python/pybind11/tools/pybind11Tools.cmake
./dionysus.egg-info/PKG-INFO
./dionysus.egg-info/SOURCES.txt
./dionysus.egg-info/dependency_links.txt
./dionysus.egg-info/not-zip-safe
./dionysus.egg-info/top_level.txt
./dist/dionysus-2.0.1.tar.gz
./doc/API.rst
./doc/Makefile
./doc/TODO
./doc/conf.py
./doc/doctest.sh
./doc/html.sh
./doc/index.rst
./doc/publish.sh
./doc/tutorial/alpha-shapes.rst_
./doc/tutorial/basics.rst
./doc/tutorial/cohomology.rst
./doc/tutorial/filtrations.rst
./doc/tutorial/index.rst
./doc/tutorial/lower-star.rst
./doc/tutorial/omni-field.rst
./doc/tutorial/persistence.rst
./doc/tutorial/plotting.rst
./doc/tutorial/rips.rst
./doc/tutorial/zigzags.rst
./doc/tutorial/figures/alpha-shape.png
./doc/tutorial/figures/barcode.png
./doc/tutorial/figures/filtration.png
./doc/tutorial/figures/lower-star.png
./doc/tutorial/figures/vietoris-rips.png
./examples/CMakeLists.txt
./examples/filtration/CMakeLists.txt
./examples/filtration/filtration-persistence.cpp
./examples/filtration/zigzag-filtration-persistence.cpp
./examples/include/cnpy.h
./examples/include/common.h
./examples/include/format.h
./examples/include/format/format.cc
./examples/include/format/format.h
./examples/include/grid/box.h
./examples/include/grid/box.hpp
./examples/include/grid/grid.h
./examples/include/grid/point.h
./examples/include/grid/vertices.h
./examples/include/opts/opts.h
./examples/lzz/CMakeLists.txt
./examples/lzz/extended-persistence.cpp
./examples/lzz/grid-topology.h
./examples/lzz/relative-lzz.cpp
./examples/lzz/relative-lzz.h
./examples/lzz/relative-lzz.hpp
./examples/lzz/relative-zz-filtration.cpp
./examples/omni-field/CMakeLists.txt
./examples/omni-field/omni-field-persistence.cpp
./examples/rips/CMakeLists.txt
./examples/rips/rips-basic.cpp
./examples/rips/rips-pairwise.cpp
./examples/rips/rips-zigzag.cpp
./examples/src/cnpy.cpp
./ext/hera/bottleneck/.gitignore
./ext/hera/bottleneck/CMakeLists.txt
./ext/hera/bottleneck/README
./ext/hera/bottleneck/license.txt
./ext/hera/bottleneck/example/CMakeLists.txt
./ext/hera/bottleneck/example/bottleneck_dist.cpp
./ext/hera/bottleneck/include/basic_defs_bt.h
./ext/hera/bottleneck/include/bottleneck.h
./ext/hera/bottleneck/include/bottleneck_detail.h
./ext/hera/bottleneck/include/bottleneck_detail.hpp
./ext/hera/bottleneck/include/bound_match.h
./ext/hera/bottleneck/include/bound_match.hpp
./ext/hera/bottleneck/include/def_debug_bt.h
./ext/hera/bottleneck/include/diagram_reader.h
./ext/hera/bottleneck/include/diagram_traits.h
./ext/hera/bottleneck/include/neighb_oracle.h
./ext/hera/bottleneck/include/dnn/utils.h
./ext/hera/bottleneck/include/dnn/geometry/euclidean-fixed.h
./ext/hera/bottleneck/include/dnn/local/kd-tree.h
./ext/hera/bottleneck/include/dnn/local/kd-tree.hpp
./ext/hera/bottleneck/include/dnn/local/search-functors.h
./ext/hera/bottleneck/include/dnn/parallel/tbb.h
./ext/hera/bottleneck/include/dnn/parallel/utils.h
./ext/hera/wasserstein/CMakeLists.txt
./ext/hera/wasserstein/license.txt
./ext/hera/wasserstein/example/wasserstein_dist.cpp
./ext/hera/wasserstein/include/auction_oracle.h
./ext/hera/wasserstein/include/auction_runner_gs.h
./ext/hera/wasserstein/include/auction_runner_jac.h
./ext/hera/wasserstein/include/basic_defs_ws.h
./ext/hera/wasserstein/include/def_debug_ws.h
./ext/hera/wasserstein/include/wasserstein.h
./ext/hera/wasserstein/include/dnn/utils.h
./ext/hera/wasserstein/include/dnn/geometry/euclidean-fixed.h
./ext/hera/wasserstein/include/dnn/local/kd-tree.h
./ext/hera/wasserstein/include/dnn/local/kd-tree.hpp
./ext/hera/wasserstein/include/dnn/local/search-functors.h
./ext/hera/wasserstein/include/dnn/parallel/tbb.h
./ext/hera/wasserstein/include/dnn/parallel/utils.h
./ext/hera/wasserstein/src/auction_oracle.cpp
./ext/hera/wasserstein/src/auction_runner_gs.cpp
./ext/hera/wasserstein/src/auction_runner_jac.cpp
./ext/hera/wasserstein/src/basic_defs.cpp
./ext/hera/wasserstein/src/wasserstein.cpp
./include/backward.hpp
./include/dionysus/chain.h
./include/dionysus/chain.hpp
./include/dionysus/clearing-reduction.h
./include/dionysus/clearing-reduction.hpp
./include/dionysus/cohomology-persistence.h
./include/dionysus/cohomology-persistence.hpp
./include/dionysus/diagram.h
./include/dionysus/distances.h
./include/dionysus/distances.hpp
./include/dionysus/filtration.h
./include/dionysus/omni-field-persistence.h
./include/dionysus/omni-field-persistence.hpp
./include/dionysus/ordinary-persistence.h
./include/dionysus/pair-recorder.h
./include/dionysus/reduced-matrix.h
./include/dionysus/reduced-matrix.hpp
./include/dionysus/reduced-row-access.h
./include/dionysus/reduction.h
./include/dionysus/relative-homology-zigzag.h
./include/dionysus/relative-homology-zigzag.hpp
./include/dionysus/rips.h
./include/dionysus/rips.hpp
./include/dionysus/row-reduction.h
./include/dionysus/row-reduction.hpp
./include/dionysus/simplex.h
./include/dionysus/sparse-row-matrix.h
./include/dionysus/sparse-row-matrix.hpp
./include/dionysus/standard-reduction.h
./include/dionysus/standard-reduction.hpp
./include/dionysus/trails-chains.h
./include/dionysus/zigzag-filtration.h
./include/dionysus/zigzag-persistence.h
./include/dionysus/zigzag-persistence.hpp
./include/dionysus/dlog/progress.h
./include/dionysus/fields/q.h
./include/dionysus/fields/z2.h
./include/dionysus/fields/zp.h
./src/backward.cpp
bindings/python/dionysus/__init__.py
bindings/python/dionysus/_version.py
bindings/python/dionysus/plot.py
dionysus.egg-info/PKG-INFO
dionysus.egg-info/SOURCES.txt
dionysus.egg-info/dependency_links.txt
dionysus.egg-info/not-zip-safe
dionysus.egg-info/top_level.txt