LICENSE
README.rst
setup.cfg
setup.py
bin/dictys
bin/dictys_helper
dictys.egg-info/PKG-INFO
dictys.egg-info/SOURCES.txt
dictys.egg-info/dependency_links.txt
dictys.egg-info/requires.txt
dictys.egg-info/top_level.txt
src/dictys/__init__.py
src/dictys/__main__.py
src/dictys/chromatin.py
src/dictys/dynamic.py
src/dictys/network.py
src/dictys/preproc.py
src/dictys/traj.py
src/dictys/net/__init__.py
src/dictys/net/layout.py
src/dictys/net/stat.py
src/dictys/plot/__init__.py
src/dictys/plot/dynamic.py
src/dictys/plot/layout.py
src/dictys/plot/panel.py
src/dictys/plot/static.py
src/dictys/scripts/chromatin_homer.py
src/dictys/scripts/chromatin_homer.sh
src/dictys/scripts/chromatin_macs2.sh
src/dictys/scripts/chromatin_wellington.sh
src/dictys/scripts/helper/expression.py
src/dictys/scripts/helper/expression_mtx.py
src/dictys/scripts/helper/fetch_osf.sh
src/dictys/scripts/helper/gene_gtf.sh
src/dictys/scripts/helper/genome_homer.sh
src/dictys/scripts/helper/makefile_check.py
src/dictys/scripts/helper/makefile_template.sh
src/dictys/scripts/helper/makefile_update.py
src/dictys/scripts/helper/motif_homer.sh
src/dictys/scripts/helper/network_inference.sh
src/dictys/scripts/helper/repo_dataverse.py
src/dictys/scripts/helper/repo_zenodo.py
src/dictys/scripts/helper/repodown.sh
src/dictys/scripts/helper/split_bam.sh
src/dictys/scripts/helper/split_bam_text.py
src/dictys/scripts/makefiles/common.mk
src/dictys/scripts/makefiles/config.mk
src/dictys/scripts/makefiles/dynamic.mk
src/dictys/scripts/makefiles/env_none.mk
src/dictys/scripts/makefiles/env_singularity.mk
src/dictys/scripts/makefiles/static.mk
src/dictys/scripts/makefiles/test_dynamic.mk
src/dictys/scripts/makefiles/test_static.mk
src/dictys/utils/__init__.py
src/dictys/utils/file.py
src/dictys/utils/importing.py
src/dictys/utils/networkx.py
src/dictys/utils/numpy.py
src/dictys/utils/parallel.py
src/dictys/utils/shell.py
src/docstring2argparse/__init__.py