CMakeLists.txt
LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
pybind11/CMakeLists.txt
pybind11/include/pybind11/attr.h
pybind11/include/pybind11/buffer_info.h
pybind11/include/pybind11/cast.h
pybind11/include/pybind11/chrono.h
pybind11/include/pybind11/common.h
pybind11/include/pybind11/complex.h
pybind11/include/pybind11/eigen.h
pybind11/include/pybind11/embed.h
pybind11/include/pybind11/eval.h
pybind11/include/pybind11/functional.h
pybind11/include/pybind11/gil.h
pybind11/include/pybind11/iostream.h
pybind11/include/pybind11/numpy.h
pybind11/include/pybind11/operators.h
pybind11/include/pybind11/options.h
pybind11/include/pybind11/pybind11.h
pybind11/include/pybind11/pytypes.h
pybind11/include/pybind11/stl.h
pybind11/include/pybind11/stl_bind.h
pybind11/include/pybind11/type_caster_pyobject_ptr.h
pybind11/include/pybind11/typing.h
pybind11/include/pybind11/detail/class.h
pybind11/include/pybind11/detail/common.h
pybind11/include/pybind11/detail/descr.h
pybind11/include/pybind11/detail/init.h
pybind11/include/pybind11/detail/internals.h
pybind11/include/pybind11/detail/type_caster_base.h
pybind11/include/pybind11/detail/typeid.h
pybind11/include/pybind11/eigen/common.h
pybind11/include/pybind11/eigen/matrix.h
pybind11/include/pybind11/eigen/tensor.h
pybind11/include/pybind11/stl/filesystem.h
pybind11/tests/CMakeLists.txt
pybind11/tests/test_cmake_build/CMakeLists.txt
pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt
pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt
pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt
pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt
pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt
pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt
pybind11/tests/test_embed/CMakeLists.txt
pybind11/tools/FindCatch.cmake
pybind11/tools/FindEigen3.cmake
pybind11/tools/FindPythonLibsNew.cmake
pybind11/tools/JoinPaths.cmake
pybind11/tools/pybind11Common.cmake
pybind11/tools/pybind11NewTools.cmake
pybind11/tools/pybind11Tools.cmake
src/DHN/DrawParameterGraph.py
src/DHN/Graphics.py
src/DHN/__init__.py
src/DHN.egg-info/PKG-INFO
src/DHN.egg-info/SOURCES.txt
src/DHN.egg-info/dependency_links.txt
src/DHN.egg-info/not-zip-safe
src/DHN.egg-info/requires.txt
src/DHN.egg-info/top_level.txt
src/DHN/Query/Graph.py
src/DHN/Query/Hexcodes.py
src/DHN/Query/__init__.py
src/DHN/Resources/logic/0_1_0n_0p_E.dat
src/DHN/Resources/logic/1_1_0n_1p.dat
src/DHN/Resources/logic/1_1_0n_1p_E.dat
src/DHN/Resources/logic/1_1_1n_0p.dat
src/DHN/Resources/logic/1_1_1n_0p_E.dat
src/DHN/Resources/logic/2_1_0n_2p.dat
src/DHN/Resources/logic/2_1_0n_2p_E.dat
src/DHN/Resources/logic/2_1_1n_1p.dat
src/DHN/Resources/logic/2_1_1n_1p_E.dat
src/DHN/Resources/logic/2_1_2n_0p.dat
src/DHN/Resources/logic/2_1_2n_0p_E.dat
src/DHN/Resources/logic/3_1_0n_3p.dat
src/DHN/Resources/logic/3_1_0n_3p_E.dat
src/DHN/Resources/logic/3_1_1n_2p.dat
src/DHN/Resources/logic/3_1_1n_2p_E.dat
src/DHN/Resources/logic/3_1_2n_1p.dat
src/DHN/Resources/logic/3_1_2n_1p_E.dat
src/DHN/Resources/logic/3_1_3n_0p.dat
src/DHN/Resources/logic/3_1_3n_0p_E.dat
src/DHN/Resources/logic/4_1_0n_4p.dat
src/DHN/Resources/logic/4_1_0n_4p_E.dat
src/DHN/Resources/logic/4_1_1n_3p.dat
src/DHN/Resources/logic/4_1_1n_3p_E.dat
src/DHN/Resources/logic/4_1_2n_2p.dat
src/DHN/Resources/logic/4_1_2n_2p_E.dat
src/DHN/Resources/logic/4_1_3n_1p.dat
src/DHN/Resources/logic/4_1_3n_1p_E.dat
src/DHN/Resources/logic/4_1_4n_0p.dat
src/DHN/Resources/logic/4_1_4n_0p_E.dat
src/DHN/Resources/logic/5_1_0n_5p.dat
src/DHN/Resources/logic/5_1_0n_5p_E.dat
src/DHN/Resources/logic/5_1_1n_4p.dat
src/DHN/Resources/logic/5_1_1n_4p_E.dat
src/DHN/Resources/logic/5_1_2n_3p.dat
src/DHN/Resources/logic/5_1_2n_3p_E.dat
src/DHN/Resources/logic/5_1_3n_2p.dat
src/DHN/Resources/logic/5_1_3n_2p_E.dat
src/DHN/Resources/logic/5_1_4n_1p.dat
src/DHN/Resources/logic/5_1_4n_1p_E.dat
src/DHN/Resources/logic/5_1_5n_0p.dat
src/DHN/Resources/logic/5_1_5n_0p_E.dat
src/DHN/_dhn/DHN.cpp
src/DHN/_dhn/include/DHN.h
src/DHN/_dhn/include/DHN.hpp
src/DHN/_dhn/include/common.h
src/DHN/_dhn/include/Dynamics/Annotation.h
src/DHN/_dhn/include/Dynamics/Annotation.hpp
src/DHN/_dhn/include/Dynamics/MorseDecomposition.h
src/DHN/_dhn/include/Dynamics/MorseDecomposition.hpp
src/DHN/_dhn/include/Dynamics/MorseGraph.h
src/DHN/_dhn/include/Dynamics/MorseGraph.hpp
src/DHN/_dhn/include/Graph/Components.h
src/DHN/_dhn/include/Graph/Components.hpp
src/DHN/_dhn/include/Graph/Digraph.h
src/DHN/_dhn/include/Graph/Digraph.hpp
src/DHN/_dhn/include/Graph/LabelledMultidigraph.h
src/DHN/_dhn/include/Graph/LabelledMultidigraph.hpp
src/DHN/_dhn/include/Graph/Poset.h
src/DHN/_dhn/include/Graph/Poset.hpp
src/DHN/_dhn/include/Graph/StrongComponents.h
src/DHN/_dhn/include/Graph/StrongComponents.hpp
src/DHN/_dhn/include/Parameter/Configuration.h
src/DHN/_dhn/include/Parameter/LogicParameter.h
src/DHN/_dhn/include/Parameter/LogicParameter.hpp
src/DHN/_dhn/include/Parameter/Network.h
src/DHN/_dhn/include/Parameter/Network.hpp
src/DHN/_dhn/include/Parameter/OrderParameter.h
src/DHN/_dhn/include/Parameter/OrderParameter.hpp
src/DHN/_dhn/include/Parameter/Parameter.h
src/DHN/_dhn/include/Parameter/Parameter.hpp
src/DHN/_dhn/include/Parameter/ParameterGraph.h
src/DHN/_dhn/include/Parameter/ParameterGraph.hpp
src/DHN/_dhn/include/Parameter/ParameterSampler.h
src/DHN/_dhn/include/Parameter/ParameterSampler.hpp
src/DHN/_dhn/include/Pattern/MatchingGraph.h
src/DHN/_dhn/include/Pattern/MatchingGraph.hpp
src/DHN/_dhn/include/Pattern/MatchingRelation.h
src/DHN/_dhn/include/Pattern/MatchingRelation.hpp
src/DHN/_dhn/include/Pattern/Pattern.h
src/DHN/_dhn/include/Pattern/Pattern.hpp
src/DHN/_dhn/include/Pattern/PatternGraph.h
src/DHN/_dhn/include/Pattern/PatternGraph.hpp
src/DHN/_dhn/include/Pattern/PatternMatch.h
src/DHN/_dhn/include/Pattern/PatternMatch.hpp
src/DHN/_dhn/include/Pattern/SearchGraph.h
src/DHN/_dhn/include/Pattern/SearchGraph.hpp
src/DHN/_dhn/include/Phase/Domain.h
src/DHN/_dhn/include/Phase/Domain.hpp
src/DHN/_dhn/include/Phase/DomainGraph.h
src/DHN/_dhn/include/Phase/DomainGraph.hpp
src/DHN/_dhn/include/Phase/Wall.h
src/DHN/_dhn/include/Phase/Wall.hpp
src/DHN/_dhn/include/Phase/WallGraph.h
src/DHN/_dhn/include/Phase/WallGraph.hpp
src/DHN/_dhn/include/Query/ComputeSingleGeneQuery.h
src/DHN/_dhn/include/Query/ComputeSingleGeneQuery.hpp
src/DHN/_dhn/include/Query/NFA.h
src/DHN/_dhn/include/Query/NFA.hpp
src/DHN/_dhn/include/Query/ThompsonsConstruction.h
src/DHN/_dhn/include/Query/ThompsonsConstruction.hpp
src/DHN/_dhn/include/Tools/SHA256.h
src/DHN/_dhn/include/Tools/hash.hpp
src/DHN/_dhn/include/Tools/json.hpp
src/DHN/_dhn/include/Tools/sqlambda.h