LICENSE.txt
MANIFEST.in
README.md
application.properties
dgenies.wsgi
pyproject.toml
requirements.txt
setup.cfg
setup.py
tools.yaml
dgenies.egg-info/PKG-INFO
dgenies.egg-info/SOURCES.txt
dgenies.egg-info/dependency_links.txt
dgenies.egg-info/not-zip-safe
dgenies.egg-info/requires.txt
dgenies.egg-info/top_level.txt
src/bin/dgenies
src/dgenies/__init__.py
src/dgenies/config_reader.py
src/dgenies/database.py
src/dgenies/logging+.py
src/dgenies/logging_.py
src/dgenies/tools.py
src/dgenies/views.py
src/dgenies/bin/all_prepare.py
src/dgenies/bin/clean_jobs.py
src/dgenies/bin/filter_contigs.py
src/dgenies/bin/index.py
src/dgenies/bin/local_scheduler.py
src/dgenies/bin/mashmap
src/dgenies/bin/merge_splitted_chrms.py
src/dgenies/bin/minimap2
src/dgenies/bin/minimap_to_json.py
src/dgenies/bin/sort_paf.py
src/dgenies/bin/split_fa.py
src/dgenies/bin/start_local_scheduler.sh
src/dgenies/lib/__init__.py
src/dgenies/lib/crons.py
src/dgenies/lib/decorators.py
src/dgenies/lib/drmaasession.py
src/dgenies/lib/fasta.py
src/dgenies/lib/functions.py
src/dgenies/lib/job_manager.py
src/dgenies/lib/latest.py
src/dgenies/lib/mailer.py
src/dgenies/lib/paf.py
src/dgenies/lib/parsers.py
src/dgenies/lib/upload_file.py
src/dgenies/lib/validators.py
src/dgenies/lib/mail_templates/dl_fasta.html
src/dgenies/lib/mail_templates/job_notification.html
src/dgenies/md/INSTALL.md
src/dgenies/md/cookies.md
src/dgenies/md/dev_manual.md
src/dgenies/md/doc_dotplot.md
src/dgenies/md/doc_formats.md
src/dgenies/md/doc_run.md
src/dgenies/md/doc_run_dgenies.md
src/dgenies/md/lorem_ipsum.md
src/dgenies/md/user_manual.md
src/dgenies/static/css/animate.css
src/dgenies/static/css/bootstrap-theme.min.css
src/dgenies/static/css/bootstrap-theme.min.css.map
src/dgenies/static/css/bootstrap.min.css
src/dgenies/static/css/bootstrap.min.css.map
src/dgenies/static/css/chosen.min.css
src/dgenies/static/css/dgenies-offline-result.min.css
src/dgenies/static/css/dgenies.css
src/dgenies/static/css/dgenies.min.css
src/dgenies/static/css/jquery-ui.min.css
src/dgenies/static/css/jquery.modal.min.css
src/dgenies/static/css/images/chosen-sprite.png
src/dgenies/static/css/images/chosen-sprite@2x.png
src/dgenies/static/css/images/loading-cascade.gif
src/dgenies/static/css/images/loading1.gif
src/dgenies/static/css/images/logo.svg
src/dgenies/static/css/images/reset.svg
src/dgenies/static/css/images/reset_hover.svg
src/dgenies/static/css/images/success.svg
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src/dgenies/static/css/images/ui-bg_fine-grain_10_f8f7f6_60x60.png
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src/dgenies/static/css/images/ui-bg_fine-grain_15_ffffff_60x60.png
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src/dgenies/static/css/images/ui-bg_glass_75_dadada_1x400.png
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src/dgenies/static/css/images/ui-icons_cd0a0a_256x240.png
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src/dgenies/static/css/images/ui-icons_ffffff_256x240.png
src/dgenies/static/fonts/glyphicons-halflings-regular.eot
src/dgenies/static/fonts/glyphicons-halflings-regular.svg
src/dgenies/static/fonts/glyphicons-halflings-regular.ttf
src/dgenies/static/fonts/glyphicons-halflings-regular.woff
src/dgenies/static/fonts/glyphicons-halflings-regular.woff2
src/dgenies/static/images/D-GENIES-result-partial.png
src/dgenies/static/images/D-GENIES-result.no-opt.png
src/dgenies/static/images/D-GENIES-result.png
src/dgenies/static/images/D-GENIES-result.svg
src/dgenies/static/images/D-GENIES-run-standalone_na.png
src/dgenies/static/images/D-GENIES-run-standalone_pa.png
src/dgenies/static/images/D-GENIES-run_na.png
src/dgenies/static/images/D-GENIES-run_pa.png
src/dgenies/static/images/contact.svg
src/dgenies/static/images/ctrl_plus_click.png
src/dgenies/static/images/ctrl_plus_mouse.png
src/dgenies/static/images/favicon.ico
src/dgenies/static/images/logo-stick.png
src/dgenies/static/images/logo.png
src/dgenies/static/images/dotplot/gap.png
src/dgenies/static/images/dotplot/inversion.png
src/dgenies/static/images/dotplot/match.png
src/dgenies/static/images/dotplot/repeat2.png
src/dgenies/static/js/BootstrapMenu.min.js
src/dgenies/static/js/FileSaver.min.js
src/dgenies/static/js/bootstrap-notify.min.js
src/dgenies/static/js/bootstrap.min.js
src/dgenies/static/js/canvg.min.js
src/dgenies/static/js/chosen.jquery.min.js
src/dgenies/static/js/d3.boxplot.events.js
src/dgenies/static/js/d3.boxplot.js
src/dgenies/static/js/d3.boxplot.mousetip.js
src/dgenies/static/js/d3.boxplot.zoom.js
src/dgenies/static/js/d3.min.js
src/dgenies/static/js/dgenies-offline-result.min.js
src/dgenies/static/js/dgenies.documentation.js
src/dgenies/static/js/dgenies.documentation.min.js
src/dgenies/static/js/dgenies.js
src/dgenies/static/js/dgenies.min.js
src/dgenies/static/js/dgenies.prototypes.js
src/dgenies/static/js/dgenies.result.controls.js
src/dgenies/static/js/dgenies.result.export.js
src/dgenies/static/js/dgenies.result.js
src/dgenies/static/js/dgenies.result.min.js
src/dgenies/static/js/dgenies.result.summary.js
src/dgenies/static/js/dgenies.run.js
src/dgenies/static/js/dgenies.run.min.js
src/dgenies/static/js/dgenies.status.js
src/dgenies/static/js/dgenies.status.min.js
src/dgenies/static/js/jquery-3.2.1.min.js
src/dgenies/static/js/jquery-ui.min.js
src/dgenies/static/js/jquery.cookie-1.4.1.min.js
src/dgenies/static/js/jquery.fileupload-process.js
src/dgenies/static/js/jquery.fileupload-validate.js
src/dgenies/static/js/jquery.fileupload.js
src/dgenies/static/js/jquery.fileupload.min.js
src/dgenies/static/js/jquery.modal.min.js
src/dgenies/static/js/popper.min.js
src/dgenies/static/js/popper.min.js.map
src/dgenies/static/js/socket.io.slim.js
src/dgenies/static/js/socket.io.slim.js.map
src/dgenies/static/js/sprintf.min.js
src/dgenies/templates/base.html
src/dgenies/templates/contact.html
src/dgenies/templates/documentation.html
src/dgenies/templates/gallery.html
src/dgenies/templates/index.html
src/dgenies/templates/map_offline.html
src/dgenies/templates/result.html
src/dgenies/templates/run.html
src/dgenies/templates/simple.html
src/dgenies/templates/status.html