Metadata-Version: 2.1
Name: dff-calc
Version: 0.1.4
Summary: Simple dF/F calculation for neural calcium traces
Home-page: https://github.com/PBLab/dFF-calc.git
Author: Hagai Har-Gil
Author-email: hagaihargil@protonmail.com
License: UNKNOWN
Platform: UNKNOWN
Classifier: Development Status :: 2 - Pre-Alpha
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.6
Requires-Dist: numpy
Requires-Dist: pandas
Requires-Dist: attrs

dff_calc
========

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    :target: https://pypi.python.org/pypi/dff_calc
    :alt: Latest PyPI version

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   :target: https://travis-ci.org
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Simple dF/F calculation for neural calcium traces, based on https://www.nature.com/articles/nprot.2010.169

Usage
-----
1. ``from dff_calc.df_f_calculation import DffCalculator``
2. Create an instance with an two-dimensional array, the rows being individual traces. Other parameters are
documented in the code.
3. Call ``.calc()`` on that instance. The returned array contains the calculated dF/F values.

Installation
------------
``pip install dff-calc``

Requirements
^^^^^^^^^^^^
Python 3.6+, numpy, pandas

Licence
-------

MIT

Authors
-------

`dff_calc` was written by `Hagai Har-Gil <hagaihargil@protonmail.com>`_, graduate student in `Dr. Pablo Blinder's Lab. <pblab.tau.ac.il/en>`_


