Metadata-Version: 2.1
Name: DeepGapSeq
Version: 0.0.1
Summary: An smFRET analysis package, including deeplearning for gap state identification
Author-email: Piers Turner <piers.turner@physics.ox.ac.uk>
Project-URL: Homepage, https://github.com/piedrro/DeepGapSeq.git
Project-URL: Bug Tracker, https://github.com/piedrro/DeepGapSeq/issues
Classifier: Programming Language :: Python :: 3
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Requires-Python: >=3.9
Description-Content-Type: text/markdown
License-File: LICENCE
Requires-Dist: matplotlib
Requires-Dist: numpy
Requires-Dist: scikit-learn
Requires-Dist: tqdm
Requires-Dist: mlxtend==0.20.0
Requires-Dist: pomegranate==0.14.8
Requires-Dist: PyQt5

# DeepGapSeq

## Installing DeepGapSeq From GitHub

    conda create –-name DeepGapSeq python==3.9
    conda activate DeepGapSeq
    conda install -c anaconda git
    conda update --all

    pip install https://github.com/piedrro/DeepGapSeq.git

### To install **MATLAB** engine (Windows):

    pip install matlabengine

    This will likely fail due to a MATLAB version issue. 
    Read the traceback, and install the recomended verison. 
    Then try again: 'pip install matlabengine==XXXX'
