# DEBase Documentation

This directory contains comprehensive documentation for the DEBase enzyme analysis pipeline.

## Directory Structure

- `api/` - API documentation and reference
- `examples/` - Usage examples and tutorials  
- `tutorials/` - Step-by-step guides

## Quick Start

See the main [README.md](../README.md) for installation and basic usage.

## Contents

1. [Installation Guide](tutorials/installation.md)
2. [API Reference](api/README.md)
3. [Usage Examples](examples/README.md)