CHANGELOG
CREDITS
LICENSE
MANIFEST.in
README.rst
pyproject.toml
setup.cfg
setup.py
dclab/__init__.py
dclab/_version.py
dclab/_version_save.py
dclab/cached.py
dclab/downsampling.py
dclab/kde_contours.py
dclab/kde_methods.py
dclab/polygon_filter.py
dclab/statistics.py
dclab/util.py
dclab/warn.py
dclab.egg-info/PKG-INFO
dclab.egg-info/SOURCES.txt
dclab.egg-info/dependency_links.txt
dclab.egg-info/entry_points.txt
dclab.egg-info/requires.txt
dclab.egg-info/top_level.txt
dclab/external/skimage/_find_contours_cy.pyx
dclab/external/skimage/_pnpoly.pyx
dclab/external/skimage/_shared/geometry.pyx
dclab/cli/__init__.py
dclab/cli/common.py
dclab/cli/task_compress.py
dclab/cli/task_condense.py
dclab/cli/task_join.py
dclab/cli/task_repack.py
dclab/cli/task_split.py
dclab/cli/task_tdms2rtdc.py
dclab/cli/task_verify_dataset.py
dclab/definitions/__init__.py
dclab/definitions/feat_const.py
dclab/definitions/feat_logic.py
dclab/definitions/meta_const.py
dclab/definitions/meta_logic.py
dclab/definitions/meta_parse.py
dclab/external/__init__.py
dclab/external/skimage/__init__.py
dclab/external/skimage/_find_contours.py
dclab/external/skimage/_find_contours_cy.pyx
dclab/external/skimage/_pnpoly.pyx
dclab/external/skimage/measure.py
dclab/external/skimage/pnpoly.py
dclab/external/skimage/_shared/__init__.py
dclab/external/skimage/_shared/geometry.pxd
dclab/external/skimage/_shared/geometry.pyx
dclab/external/statsmodels/__init__.py
dclab/external/statsmodels/nonparametric/__init__.py
dclab/external/statsmodels/nonparametric/_kernel_base.py
dclab/external/statsmodels/nonparametric/kernel_density.py
dclab/external/statsmodels/nonparametric/kernels.py
dclab/features/__init__.py
dclab/features/bright.py
dclab/features/contour.py
dclab/features/fl_crosstalk.py
dclab/features/inert_ratio.py
dclab/features/volume.py
dclab/features/emodulus/__init__.py
dclab/features/emodulus/emodulus_lut_LE-2D-FEM-19.txt
dclab/features/emodulus/load.py
dclab/features/emodulus/pxcorr.py
dclab/features/emodulus/scale_linear.py
dclab/features/emodulus/viscosity.py
dclab/isoelastics/__init__.py
dclab/isoelastics/isoel-linear-2Daxis-FEM-area_um-deform.txt
dclab/isoelastics/isoel-linear-2Daxis-FEM-volume-deform.txt
dclab/isoelastics/isoel-linear-2Daxis-analyt-area_um-deform.txt
dclab/lme4/__init__.py
dclab/lme4/rlibs.py
dclab/lme4/rsetup.py
dclab/lme4/wrapr.py
dclab/rtdc_dataset/__init__.py
dclab/rtdc_dataset/check.py
dclab/rtdc_dataset/config.py
dclab/rtdc_dataset/core.py
dclab/rtdc_dataset/export.py
dclab/rtdc_dataset/feat_temp.py
dclab/rtdc_dataset/filter.py
dclab/rtdc_dataset/fmt_dcor.py
dclab/rtdc_dataset/fmt_dict.py
dclab/rtdc_dataset/fmt_hdf5.py
dclab/rtdc_dataset/fmt_hierarchy.py
dclab/rtdc_dataset/load.py
dclab/rtdc_dataset/write_hdf5.py
dclab/rtdc_dataset/writer.py
dclab/rtdc_dataset/feat_anc_core/__init__.py
dclab/rtdc_dataset/feat_anc_core/af_basic.py
dclab/rtdc_dataset/feat_anc_core/af_emodulus.py
dclab/rtdc_dataset/feat_anc_core/af_fl_max_ctc.py
dclab/rtdc_dataset/feat_anc_core/af_image_contour.py
dclab/rtdc_dataset/feat_anc_core/af_ml_class.py
dclab/rtdc_dataset/feat_anc_core/ancillary_feature.py
dclab/rtdc_dataset/feat_anc_ml/__init__.py
dclab/rtdc_dataset/feat_anc_ml/ml_feature.py
dclab/rtdc_dataset/feat_anc_ml/ml_libs.py
dclab/rtdc_dataset/feat_anc_ml/ml_model.py
dclab/rtdc_dataset/feat_anc_ml/modc.py
dclab/rtdc_dataset/feat_anc_ml/hook_tensorflow/__init__.py
dclab/rtdc_dataset/feat_anc_ml/hook_tensorflow/tf_dataset.py
dclab/rtdc_dataset/feat_anc_ml/hook_tensorflow/tf_model.py
dclab/rtdc_dataset/feat_anc_plugin/__init__.py
dclab/rtdc_dataset/feat_anc_plugin/plugin_feature.py
dclab/rtdc_dataset/fmt_tdms/__init__.py
dclab/rtdc_dataset/fmt_tdms/event_contour.py
dclab/rtdc_dataset/fmt_tdms/event_image.py
dclab/rtdc_dataset/fmt_tdms/event_mask.py
dclab/rtdc_dataset/fmt_tdms/event_trace.py
dclab/rtdc_dataset/fmt_tdms/exc.py
dclab/rtdc_dataset/fmt_tdms/naming.py
docs/README.md
docs/conf.py
docs/dclab.bib
docs/index.rst
docs/requirements.txt
docs/sec_advanced_usage.rst
docs/sec_av_dcor.rst
docs/sec_av_emodulus.rst
docs/sec_av_feat_plugin.rst
docs/sec_av_feat_temp.rst
docs/sec_av_fluorescence.rst
docs/sec_av_lme4.rst
docs/sec_av_ml.rst
docs/sec_av_notation.rst
docs/sec_av_rtdc_dataset.rst
docs/sec_av_scatter.rst
docs/sec_changelog.rst
docs/sec_cli.rst
docs/sec_code_reference.rst
docs/sec_examples.rst
docs/sec_getting_started.rst
docs/sec_imprint.rst
docs/sec_z_bib.rst
docs/data/example_plugin.py
docs/data/example_plugin_metadata.py
docs/extensions/dclab_defs.py
docs/extensions/fancy_include.py
docs/extensions/github_changelog.py
docs/extensions/simple_argparse.py
docs/figures/plot_emodulus_lut.py
examples/emodulus_dcor.jpg
examples/emodulus_dcor.py
examples/generate_example_images.py
examples/isoelastics.jpg
examples/isoelastics.py
examples/lme4_glmer_diff.py
examples/lme4_lmer.jpg
examples/lme4_lmer.py
examples/ml_builtin.jpg
examples/ml_builtin.py
examples/ml_tensorflow.jpg
examples/ml_tensorflow.py
examples/overview_plot.jpg
examples/overview_plot.py
examples/plugin_example.py
examples/plugin_usage.jpg
examples/plugin_usage.py
tests/README.md
tests/conftest.py
tests/helper_methods.py
tests/test_cache.py
tests/test_cli.py
tests/test_cli_argparse.py
tests/test_cli_join.py
tests/test_config_value_mapping.py
tests/test_dfn.py
tests/test_downsampling.py
tests/test_export.py
tests/test_feat_bright.py
tests/test_feat_contour.py
tests/test_feat_emodulus.py
tests/test_feat_emodulus_viscosity.py
tests/test_feat_fl_crosstalk.py
tests/test_feat_inert_ratio.py
tests/test_feat_volume.py
tests/test_isoelastics.py
tests/test_kde_contours.py
tests/test_kde_methods.py
tests/test_lme4.py
tests/test_polygon_contains.py
tests/test_polygon_filter.py
tests/test_rtdc_check_dataset.py
tests/test_rtdc_config.py
tests/test_rtdc_downsampling.py
tests/test_rtdc_feat_anc_core.py
tests/test_rtdc_feat_anc_ml.py
tests/test_rtdc_feat_anc_ml_tensorflow.py
tests/test_rtdc_feat_anc_plugin.py
tests/test_rtdc_feat_temp.py
tests/test_rtdc_filter.py
tests/test_rtdc_fmt_dcor.py
tests/test_rtdc_fmt_dict.py
tests/test_rtdc_fmt_hdf5.py
tests/test_rtdc_fmt_hierarchy.py
tests/test_rtdc_fmt_tdms.py
tests/test_rtdc_hash.py
tests/test_rtdc_kde.py
tests/test_rtdc_limit_events.py
tests/test_rtdc_writer.py
tests/test_statistics.py
tests/test_util.py
tests/data/README.md
tests/data/example_isoelastics.txt
tests/data/feat_anc_plugin_creative.py
tests/data/fmt-hdf5_fl-no-contour_2019.zip
tests/data/fmt-hdf5_fl_2017.zip
tests/data/fmt-hdf5_fl_2018.zip
tests/data/fmt-hdf5_image-bg_2020.zip
tests/data/fmt-hdf5_image-mask-blood_2021.zip
tests/data/fmt-hdf5_mask-contour_2018.zip
tests/data/fmt-hdf5_polygon_gate_2021.zip
tests/data/fmt-tdms_2fl-no-image_2017.zip
tests/data/fmt-tdms_fl-image-bright_2017.zip
tests/data/fmt-tdms_fl-image-large-fov_2017.zip
tests/data/fmt-tdms_fl-image_2016.zip
tests/data/fmt-tdms_fl_2015.zip
tests/data/fmt-tdms_minimal_2016.zip
tests/data/fmt-tdms_shapein-2.0.1-no-image_2017.zip