LICENSE
README.md
setup.py
src/DAJIN2/DAJIN2.py
src/DAJIN2/__init__.py
src/DAJIN2/batch.py
src/DAJIN2/gui.py
src/DAJIN2/single.py
src/DAJIN2/view.py
src/DAJIN2.egg-info/PKG-INFO
src/DAJIN2.egg-info/SOURCES.txt
src/DAJIN2.egg-info/dependency_links.txt
src/DAJIN2.egg-info/entry_points.txt
src/DAJIN2.egg-info/requires.txt
src/DAJIN2.egg-info/top_level.txt
src/DAJIN2/core/__init__.py
src/DAJIN2/core/core.py
src/DAJIN2/core/classification/__init__.py
src/DAJIN2/core/classification/classify.py
src/DAJIN2/core/classification/detect_sv.py
src/DAJIN2/core/clustering/__init__.py
src/DAJIN2/core/clustering/clustering_main.py
src/DAJIN2/core/clustering/make_scores.py
src/DAJIN2/core/clustering/mask_control.py
src/DAJIN2/core/clustering/return_labels.py
src/DAJIN2/core/clustering/screen_diffloci.py
src/DAJIN2/core/consensus/__init__.py
src/DAJIN2/core/consensus/consensus_main.py
src/DAJIN2/core/preprocess/__init__.py
src/DAJIN2/core/preprocess/calc_midsv.py
src/DAJIN2/core/preprocess/check_inputs.py
src/DAJIN2/core/preprocess/format_inputs.py
src/DAJIN2/core/preprocess/mappy_align.py
src/DAJIN2/core/report/__init__.py
src/DAJIN2/core/report/report_bam.py
src/DAJIN2/core/report/report_files.py
src/DAJIN2/postprocess/__init__.py
src/DAJIN2/postprocess/report.py