LICENSE
README.md
pyproject.toml
setup.cfg
setup.py
cwas/__init__.py
cwas/__main__.py
cwas/annotation.py
cwas/argparser.py
cwas/binomial_test.py
cwas/burden_shift.py
cwas/burden_test.py
cwas/categorization.py
cwas/cli.py
cwas/configuration.py
cwas/dawn.py
cwas/effective_num_test.py
cwas/env.py
cwas/extract_variant.py
cwas/factory.py
cwas/permutation_test.py
cwas/preparation.py
cwas/risk_score.py
cwas/runnable.py
cwas/start.py
cwas.egg-info/PKG-INFO
cwas.egg-info/SOURCES.txt
cwas.egg-info/dependency_links.txt
cwas.egg-info/entry_points.txt
cwas.egg-info/requires.txt
cwas.egg-info/top_level.txt
cwas/core/__init__.py
cwas/core/common.py
cwas/core/annotation/__init__.py
cwas/core/annotation/bed.py
cwas/core/annotation/vep.py
cwas/core/burden_test/__init__.py
cwas/core/burden_test/binomial.py
cwas/core/categorization/__init__.py
cwas/core/categorization/categorizer.py
cwas/core/categorization/category.py
cwas/core/categorization/parser.py
cwas/core/categorization/utils.py
cwas/core/configuration/__init__.py
cwas/core/configuration/create.py
cwas/core/configuration/settings.py
cwas/core/dawn/__init__.py
cwas/core/dawn/clustering.py
cwas/core/dawn/supernodeWGS.py
cwas/core/preparation/__init__.py
cwas/core/preparation/annotation.py
cwas/core/preparation/bedreader.py
cwas/utils/__init__.py
cwas/utils/check.py
cwas/utils/cmd.py
cwas/utils/log.py
tests/__init__.py
tests/conftest.py
tests/test_annotation.py
tests/test_binomial_test.py
tests/test_configuration.py
tests/test_env.py
tests/test_factory.py
tests/test_preparation.py
tests/test_restart.py
tests/test_runnable.py
tests/test_start.py
tests/core/__init__.py
tests/core/test_common.py
tests/core/annotation/__init__.py
tests/core/annotation/test_vep.py
tests/core/categorization/__init__.py
tests/core/categorization/test_category.py
tests/core/categorization/test_parser.py
tests/core/categorization/test_utils.py
tests/core/configuration/__init__.py
tests/core/configuration/test_create.py
tests/core/dawn/__init__.py
tests/core/dawn/test_clustering.py
tests/core/dawn/test_supernodeWGS.py
tests/core/preparation/__init__.py
tests/core/preparation/test_annotation.py
tests/core/preparation/test_bedreader.py