LICENSE
README.md
setup.py
src/benchmarks/__init__.py
src/benchmarks/cmp_NA19240.py
src/benchmarks/eval_BND.py
src/benchmarks/eval_forcecalling.py
src/benchmarks/eval_sim.py
src/benchmarks/eval_trio.py
src/benchmarks/multi_platform.py
src/benchmarks/sta_venn.py
src/benchmarks/vcf2bedpe.py
src/cuteSV/CommandRunner.py
src/cuteSV/__init__.py
src/cuteSV/cuteSV
src/cuteSV/cuteSV_Description.py
src/cuteSV/cuteSV_forcecalling.py
src/cuteSV/cuteSV_genotype.py
src/cuteSV/cuteSV_resolveDUP.py
src/cuteSV/cuteSV_resolveINDEL.py
src/cuteSV/cuteSV_resolveINV.py
src/cuteSV/cuteSV_resolveTRA.py
src/cuteSV/diploid_calling.py
src/cuteSV.egg-info/PKG-INFO
src/cuteSV.egg-info/SOURCES.txt
src/cuteSV.egg-info/dependency_links.txt
src/cuteSV.egg-info/not-zip-safe
src/cuteSV.egg-info/requires.txt
src/cuteSV.egg-info/top_level.txt