README.rst
setup.cfg
setup.py
csr/__init__.py
csr/csr.py
csr/entity_reader.py
csr/entity_writer.py
csr/exceptions.py
csr/logging.py
csr/study_registry_reader.py
csr/study_registry_writer.py
csr/subject_registry_reader.py
csr/subject_registry_writer.py
csr/tabular_file_reader.py
csr2cbioportal/__init__.py
csr2cbioportal/create_caselist.py
csr2cbioportal/create_metafile.py
csr2cbioportal/csr2cbioportal.py
csr2cbioportal/transform_clinical.py
csr2transmart/__init__.py
csr2transmart/csr2transmart.py
csr2transmart/ontology_config.py
csr2transmart.egg-info/PKG-INFO
csr2transmart.egg-info/SOURCES.txt
csr2transmart.egg-info/dependency_links.txt
csr2transmart.egg-info/entry_points.txt
csr2transmart.egg-info/not-zip-safe
csr2transmart.egg-info/requires.txt
csr2transmart.egg-info/top_level.txt
csr2transmart/mappers/__init__.py
csr2transmart/mappers/csr_mapper.py
csr2transmart/mappers/observation_mapper.py
csr2transmart/mappers/ontology_mapper.py
sources2csr/__init__.py
sources2csr/codebook.py
sources2csr/codebook_mapper.py
sources2csr/derived_values.py
sources2csr/ngs.py
sources2csr/ngs2csr.py
sources2csr/ngs_maf_reader.py
sources2csr/ngs_reader.py
sources2csr/ngs_seg_reader.py
sources2csr/ngs_txt_reader.py
sources2csr/sources2csr.py
sources2csr/sources_config.py
sources2csr/sources_reader.py