from ._assembly import (
    AbstractAssembly as AbstractAssembly,
    compute_helical_lattice_positions as compute_helical_lattice_positions,
    compute_helical_lattice_rotations as compute_helical_lattice_rotations,
    Helix as Helix,
)
from ._config import ImageConfig as ImageConfig
from ._conformation import (
    AbstractConformation as AbstractConformation,
    DiscreteConformation as DiscreteConformation,
)
from ._detector import (
    AbstractDetector as AbstractDetector,
    AbstractDQE as AbstractDQE,
    GaussianDetector as GaussianDetector,
    IdealDQE as IdealDQE,
    PoissonDetector as PoissonDetector,
)
from ._dose import ElectronDose as ElectronDose
from ._ice import (
    AbstractIce as AbstractIce,
    GaussianIce as GaussianIce,
)
from ._instrument import Instrument as Instrument
from ._integrators import (
    AbstractPotentialIntegrator as AbstractPotentialIntegrator,
    extract_slice as extract_slice,
    extract_slice_with_cubic_spline as extract_slice_with_cubic_spline,
    FourierSliceExtract as FourierSliceExtract,
    NufftProject as NufftProject,
    project_with_nufft as project_with_nufft,
)
from ._optics import (
    AbstractOptics as AbstractOptics,
    CTF as CTF,
    WeakPhaseOptics as WeakPhaseOptics,
)
from ._pipeline import (
    AbstractPipeline as AbstractPipeline,
    AssemblyPipeline as AssemblyPipeline,
    ImagePipeline as ImagePipeline,
)
from ._pose import (
    AbstractPose as AbstractPose,
    AxisAnglePose as AxisAnglePose,
    EulerAnglePose as EulerAnglePose,
    QuaternionPose as QuaternionPose,
)
from ._potential import (
    AbstractFourierVoxelGridPotential as AbstractFourierVoxelGridPotential,
    AbstractScatteringPotential as AbstractScatteringPotential,
    AbstractVoxelPotential as AbstractVoxelPotential,
    build_real_space_voxels_from_atoms as build_real_space_voxels_from_atoms,
    evaluate_3d_atom_potential as evaluate_3d_atom_potential,
    evaluate_3d_real_space_gaussian as evaluate_3d_real_space_gaussian,
    FourierVoxelGridPotential as FourierVoxelGridPotential,
    FourierVoxelGridPotentialInterpolator as FourierVoxelGridPotentialInterpolator,
    RealVoxelCloudPotential as RealVoxelCloudPotential,
    RealVoxelGridPotential as RealVoxelGridPotential,
)
from ._specimen import (
    AbstractEnsemble as AbstractEnsemble,
    AbstractSpecimen as AbstractSpecimen,
    DiscreteEnsemble as DiscreteEnsemble,
    Specimen as Specimen,
)
