MANIFEST.in
README.md
pyproject.toml
setup.py
bean/__init__.py
bean/annotate/__init__.py
bean/annotate/_supporting_fn.py
bean/annotate/filter_alleles.py
bean/annotate/translate_allele.py
bean/annotate/utils.py
bean/cli/__init__.py
bean/cli/count.py
bean/cli/count_samples.py
bean/cli/create_screen.py
bean/cli/execute.py
bean/cli/filter.py
bean/cli/profile.py
bean/cli/qc.py
bean/cli/run.py
bean/framework/AminoAcidEdit.py
bean/framework/Edit.py
bean/framework/ReporterScreen.py
bean/framework/__init__.py
bean/framework/allele_counts.py
bean/framework/parser.py
bean/framework/read_from_csvs.py
bean/mapping/CRISPResso2Align.c
bean/mapping/CRISPResso2Align.pyx
bean/mapping/GuideEditCounter.py
bean/mapping/__init__.py
bean/mapping/_supporting_fn.py
bean/mapping/utils.py
bean/model/__init__.py
bean/model/model.py
bean/model/parser.py
bean/model/readwrite.py
bean/model/run.py
bean/model/survival_model.py
bean/model/utils.py
bean/plotting/__init__.py
bean/plotting/allele_stats.py
bean/plotting/editing_patterns.py
bean/plotting/utils.py
bean/preprocessing/__init__.py
bean/preprocessing/data_class.py
bean/preprocessing/get_alpha0.py
bean/preprocessing/get_pi_alpha0.py
bean/preprocessing/utils.py
bean/qc/__init__.py
bean/qc/guide_qc.py
bean/qc/parser.py
bean/qc/sample_qc.py
bean/qc/utils.py
bean/utils/__init__.py
bean/utils/arithmetric.py
bean/utils/plot.py
bin/bean
crispr_bean.egg-info/PKG-INFO
crispr_bean.egg-info/SOURCES.txt
crispr_bean.egg-info/dependency_links.txt
crispr_bean.egg-info/requires.txt
crispr_bean.egg-info/top_level.txt