LICENSE
MANIFEST.in
README.md
pyproject.toml
crimm/Fetchers.py
crimm/__init__.py
crimm.egg-info/PKG-INFO
crimm.egg-info/SOURCES.txt
crimm.egg-info/dependency_links.txt
crimm.egg-info/requires.txt
crimm.egg-info/top_level.txt
crimm/Adaptors/OMMAdaptors.py
crimm/Adaptors/PropKaAdaptors.py
crimm/Adaptors/RDKitAdaptor.py
crimm/Adaptors/__init__.py
crimm/Adaptors/pyCHARMMAdaptors.py
crimm/Data/connect_records.py
crimm/Data/toppar/carb.prm
crimm/Data/toppar/carb.rtf
crimm/Data/toppar/cgenff.prm
crimm/Data/toppar/cgenff.rtf
crimm/Data/toppar/ethers.prm
crimm/Data/toppar/ethers.rtf
crimm/Data/toppar/lipid.prm
crimm/Data/toppar/lipid.rtf
crimm/Data/toppar/na.prm
crimm/Data/toppar/na.rtf
crimm/Data/toppar/na_orig.rtf
crimm/Data/toppar/prot.prm
crimm/Data/toppar/prot.rtf
crimm/Data/toppar/prot_orig.rtf
crimm/IO/MMCIF2Dict.py
crimm/IO/MMCIFParser.py
crimm/IO/PDBParser.py
crimm/IO/PDBString.py
crimm/IO/PRMParser.py
crimm/IO/RTFParser.py
crimm/IO/StructureBuilder.py
crimm/IO/__init__.py
crimm/Modeller/CoordManipulator.py
crimm/Modeller/LoopBuilder.py
crimm/Modeller/ParamLoader.py
crimm/Modeller/SeqChainGenerator.py
crimm/Modeller/TopoFixer.py
crimm/Modeller/TopoLoader.py
crimm/Modeller/__init__.py
crimm/StructEntities/Atom.py
crimm/StructEntities/Chain.py
crimm/StructEntities/Model.py
crimm/StructEntities/Residue.py
crimm/StructEntities/Structure.py
crimm/StructEntities/TopoDefinitions.py
crimm/StructEntities/TopoElements.py
crimm/StructEntities/Topology.py
crimm/StructEntities/__init__.py
crimm/Superimpose/ChainSuperimposer.py
crimm/Superimpose/__init__.py
crimm/Visualization/NGLVisualization.py
crimm/Visualization/__init__.py
src/chatgpt/steepestDescent.py
tests/test_pdb.py
tests/test_pdb_standard.py