LICENSE.txt
MANIFEST.in
PKG-INFO
README.md
distribute_setup.py
setup.py
bin/annotate_CpG.py
bin/beta_m_conversion.py
bin/beta_profile.py
bin/chrom_distribution.py
bin/dmc_bb.py
bin/dmc_fisher.py
bin/dmc_glm.py
bin/dmc_logit.py
bin/dmc_nonparametric.py
bin/dmc_ttest.py
bin/genomic_distribution_1.py
bin/genomic_distribution_2.py
bin/methyl_logo.py
bin/region_profile.py
bin/region_stat.py
bin/trichotmize.py
img/.DS_Store
img/Diff_analysis_table.png
img/Glm_heatmap_FDR_0.01.png
img/Glm_pval.dist.png
img/M.png
img/beta.png
img/beta_profile.png
img/beta_vs_M.png
img/beta_vs_M_curve.png
img/chromDist.CpG_perMb.png
img/chromDist.CpG_percent.png
img/chromDist.CpG_total.png
img/emails.png
img/gene_domain.jpg
img/gene_domain.png
img/genome_dist2.png
img/genomic_dist1.png
img/logit_bin_pvalue_dist.png
img/methyl_logo.png
img/region_profile.png
img/trichotmize.png
lib/CpGtools.egg-info/PKG-INFO
lib/CpGtools.egg-info/SOURCES.txt
lib/CpGtools.egg-info/dependency_links.txt
lib/CpGtools.egg-info/not-zip-safe
lib/CpGtools.egg-info/requires.txt
lib/CpGtools.egg-info/top_level.txt
lib/cpgmodule/BED.py
lib/cpgmodule/MI.py
lib/cpgmodule/__init__.py
lib/cpgmodule/cgID.py
lib/cpgmodule/imotif.py
lib/cpgmodule/ireader.py
lib/cpgmodule/padjust.py
lib/cpgmodule/region2gene.py
lib/cpgmodule/utils.py
lib/cpgtools.egg-info/PKG-INFO
lib/cpgtools.egg-info/SOURCES.txt
lib/cpgtools.egg-info/dependency_links.txt
lib/cpgtools.egg-info/not-zip-safe
lib/cpgtools.egg-info/requires.txt
lib/cpgtools.egg-info/top_level.txt
refgene/hg19.RefSeq.union.bed.gz
refgene/hg38.RefSeq.union.bed.gz
refgene/mm10.RefSeq.union.bed.gz
refgene/mm9.RefSeq.union.bed.gz