from ._preprocessing import *

__all__ = [
    "initialize_adata_object",
    "get_highly_variable_genes",
    "remove_cell_cycle_correlated_genes",
    "get_X_pca",
    "get_X_emb",
    "get_state_info",
    "get_X_clone",
    "refine_state_info_by_leiden_clustering",
    "refine_state_info_by_marker_genes",
    "filter_clone_size",
    "filter_cells_with_many_barcodes",
    "filter_nonclonal_cells",
]
