"""
Utility module for CORE

Contains utility functions for:
- Image transformations
- Point set operations
- Deformation field handling
- MHA file operations
"""

from core.utils.util import (
    skip_subsample,
    gamma_corrections,
    tensor_to_rgb_numpy,
    create_deformation_field,
    create_nonrigid_mha,
    create_deform,
    apply_deformation_to_points,
    create_displacement_field_for_wsi,
    _check_dims,
    compute_center_of_mass,
    apply_affine_transformation,
    convert_pytorch_checkpoint,
    create_pyramid,
    scale_transformation_matrix,
    warp_image,
    matrix_mha,
    combine_deformation,
    apply_displacement_field,
    sort_coordinates,
    dice,
    mse,
    rotate_point,
    phase_correlation,
    resample_tensor_to_size,
    gaussian_smoothing_tensor,
    gaussian_smoothing_numpy,
)

from core.utils.mha_wsi import (
    get_image_shape,
    array_to_vips,
    vips_to_array,
    resize_displacement_field,
)

__all__ = [
    # From util.py
    "skip_subsample",
    "gamma_corrections",
    "tensor_to_rgb_numpy",
    "create_deformation_field",
    "create_nonrigid_mha",
    "create_deform",
    "apply_deformation_to_points",
    "create_displacement_field_for_wsi",
    "_check_dims",
    "compute_center_of_mass",
    "apply_affine_transformation",
    "convert_pytorch_checkpoint",
    "create_pyramid",
    "scale_transformation_matrix",
    "warp_image",
    "matrix_mha",
    "combine_deformation",
    "apply_displacement_field",
    "sort_coordinates",
    "dice",
    "mse",
    "rotate_point",
    "phase_correlation",
    "resample_tensor_to_size",
    "gaussian_smoothing_tensor",
    "gaussian_smoothing_numpy",
    
    # From mha_wsi.py
    "get_image_shape",
    "array_to_vips",
    "vips_to_array",
    "resize_displacement_field",
]
