LICENSE.md
README.md
setup.py
src/concord/__init__.py
src/concord/concord.py
src/concord/ml.py
src/concord/pl.py
src/concord/ul.py
src/concord/model/__init__.py
src/concord/model/anndataset.py
src/concord/model/build_layer.py
src/concord/model/chunkloader.py
src/concord/model/dataloader.py
src/concord/model/knn.py
src/concord/model/loss.py
src/concord/model/model.py
src/concord/model/sampler.py
src/concord/model/trainer.py
src/concord/plotting/__init__.py
src/concord/plotting/palettes.py
src/concord/plotting/pl_batch.py
src/concord/plotting/pl_benchmark.py
src/concord/plotting/pl_datacoverage.py
src/concord/plotting/pl_embedding.py
src/concord/plotting/pl_enrichment.py
src/concord/plotting/pl_general.py
src/concord/plotting/pl_geometry.py
src/concord/plotting/pl_graph.py
src/concord/plotting/pl_heatmap.py
src/concord/plotting/pl_model.py
src/concord/plotting/pl_path.py
src/concord/plotting/pl_tda.py
src/concord/utils/Hs_Mm_conversion.py
src/concord/utils/__init__.py
src/concord/utils/anndata_utils.py
src/concord/utils/batch_analysis.py
src/concord/utils/benchmark.py
src/concord/utils/cell_cycle.py
src/concord/utils/cellxgene.py
src/concord/utils/coverage_estimator.py
src/concord/utils/doublet_utils.py
src/concord/utils/enrichment_analysis.py
src/concord/utils/estimate_aug_mask_prob.py
src/concord/utils/evaluator.py
src/concord/utils/feature_selector.py
src/concord/utils/geometry.py
src/concord/utils/importance_analysis.py
src/concord/utils/io.py
src/concord/utils/other_util.py
src/concord/utils/path_analysis.py
src/concord/utils/preprocessor.py
src/concord/utils/run_dim_reduction.py
src/concord/utils/run_integration_methods.py
src/concord/utils/simulation.py
src/concord/utils/sparsity.py
src/concord/utils/tda.py
src/concord/utils/timer.py
src/concord/utils/value_check.py
src/concord/utils/visCello.py
src/concord_sc.egg-info/PKG-INFO
src/concord_sc.egg-info/SOURCES.txt
src/concord_sc.egg-info/dependency_links.txt
src/concord_sc.egg-info/requires.txt
src/concord_sc.egg-info/top_level.txt