MANIFEST.in
setup.py
cobra/VERSION
cobra/__init__.py
cobra/test_all.py
cobra/version.py
cobra.egg-info/PKG-INFO
cobra.egg-info/SOURCES.txt
cobra.egg-info/dependency_links.txt
cobra.egg-info/requires.txt
cobra.egg-info/top_level.txt
cobra/.idea/encodings.xml
cobra/.idea/misc.xml
cobra/.idea/modules.xml
cobra/.idea/other.xml
cobra/.idea/testrunner.xml
cobra/.idea/vcs.xml
cobra/.idea/workspace.xml
cobra/.idea/scopes/scope_settings.xml
cobra/core/ArrayBasedModel.py
cobra/core/DictList.py
cobra/core/Formula.py
cobra/core/Gene.py
cobra/core/Metabolite.py
cobra/core/Model.py
cobra/core/Object.py
cobra/core/Reaction.py
cobra/core/Solution.py
cobra/core/Species.py
cobra/core/__init__.py
cobra/external/__init__.py
cobra/external/ppmap.py
cobra/external/six.py
cobra/flux_analysis/__init__.py
cobra/flux_analysis/deletion_worker.py
cobra/flux_analysis/double_deletion.py
cobra/flux_analysis/essentiality.py
cobra/flux_analysis/moma.py
cobra/flux_analysis/objective.py
cobra/flux_analysis/parsimonious.py
cobra/flux_analysis/phenotype_phase_plane.py
cobra/flux_analysis/reaction.py
cobra/flux_analysis/single_deletion.py
cobra/flux_analysis/variability.py
cobra/io/__init__.py
cobra/io/json.py
cobra/io/mat.py
cobra/io/sbml.py
cobra/manipulation/__init__.py
cobra/manipulation/delete.py
cobra/manipulation/modify.py
cobra/mlab/__init__.py
cobra/mlab/mlab.py
cobra/mlab/matlab_scripts/cell_to_string.m
cobra/mlab/matlab_scripts/create_container.m
cobra/mlab/matlab_scripts/load_mat.m
cobra/mlab/matlab_scripts/save_from_python.m
cobra/solvers/__init__.py
cobra/solvers/cglpk.c
cobra/solvers/cplex_solver.py
cobra/solvers/cplex_solver_java.py
cobra/solvers/glpk_solver.py
cobra/solvers/glpk_solver_java.py
cobra/solvers/gurobi_solver.py
cobra/solvers/gurobi_solver_java.py
cobra/solvers/legacy.py
cobra/solvers/parameters.py
cobra/solvers/deprecated/glpk.py
cobra/solvers/deprecated/gurobi.py
cobra/stats/__init__.py
cobra/stats/stats.py
cobra/test/__init__.py
cobra/test/flux_analysis.py
cobra/test/io_tests.py
cobra/test/solvers.py
cobra/test/unit_tests.py
cobra/test/data/Yersinia_pestis_CO92_iPC815.pickle
cobra/test/data/Yersinia_pestis_CO92_iPC815.xml
cobra/test/data/gurobi.log
cobra/test/data/iJO1366.json
cobra/test/data/iJO1366.mat
cobra/test/data/iJO1366.pickle
cobra/test/data/iJO1366.xml
cobra/test/data/salmonella.genes
cobra/test/data/salmonella.media
cobra/test/data/salmonella.pickle
cobra/test/data/salmonella.xml
cobra/test/data/salmonella_fbc.xml
cobra/test/data/salmonella_reaction_p_values.pickle
cobra/test/data/update_pickles.py
cobra/topology/__init__.py
cobra/topology/reporter_metabolites.py