CNN clustering — cnnclustering documentation

# CNN clustering

- Installation instructions
- Quickstart
- Tutorials
  - Basic usage of the cnn module
  - scikit-learn Toy data sets
  - Hierarchical clustering basics
  - Data input formats
  - Density based clustering explained
  - Molecular dynamics application example
- API Reference
  - cnn - A Python module for common-nearest-neighbour (CNN) clustering
  - cmsm - A Python module for core-set Markov-state model (csMSM) estimation

# Indices and tables

- Index

- Module Index

- Search Page